RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 Q6ZR03 302 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 HIST2H3AQ71DI3 136 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 SLC35F2Q8IXU6 374 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 YIPF7Q8N8F6 280 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 ZNF540Q8NDQ6 660 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 ZNF555Q8NEP9 628 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 DEFB108BQ8NET1 73 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 OR8G5Q8NG78 346 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 OR10H4Q8NGA5 316 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 OR13G1Q8NGZ3 307 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 ZNF420Q8TAQ5 688 aaPredicted RBP4.3□□□□□ -1.72
CHPT1-209ENST00000552329 CYGBQ8WWM9 190 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 RAB1CQ92928 201 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 DUS3LQ96G46 650 aaKnown RBP4.3□□□□□ -1.72
CHPT1-209ENST00000552329 TIMD4Q96H15 378 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 REEP6Q96HR9 211 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 OR2V2Q96R30 315 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 GAL3ST1Q99999 423 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 APOL4Q9BPW4 351 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 C9orf16Q9BUW7 83 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 MROQ9BYG7 248 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 GABARAPL1Q9H0R8 117 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 MYOZ1Q9NP98 299 aaPredicted RBP4.3□□□□□ -1.72
CHPT1-209ENST00000552329 DCAF16Q9NXF7 216 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 GMPPBQ9Y5P6 360 aa4.3□□□□□ -1.72
CHPT1-209ENST00000552329 AKAP9Q99996 3911 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 TMEM269A0A1B0GVZ9 245 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 A0A1W2PRV1 198 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 CCDC182A6NF36 153 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 A6NIN4 97 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 CD300LBA8K4G0 201 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 CLDN25C9JDP6 229 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 H0YHG0 523 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 NDUFS8O00217 210 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 ENTPD6O75354 484 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 CLIC3O95833 236 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 WNT2P09544 360 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 ALOX5APP20292 161 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 CRYBB2P43320 205 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 SRP9P49458 86 aaKnown RBP4.29□□□□□ -1.72
CHPT1-209ENST00000552329 TMEM33P57088 247 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 IL5RAQ01344 420 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 TEX30Q5JUR7 227 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 FAM201AQ5SY85 155 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 NXNL2Q5VZ03 156 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 C12orf73Q69YU5 71 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 FAHD2BQ6P2I3 314 aaPredicted RBP4.29□□□□□ -1.72
CHPT1-209ENST00000552329 ZNF322Q6U7Q0 402 aaPredicted RBP4.29□□□□□ -1.72
CHPT1-209ENST00000552329 FBXW12Q6X9E4 464 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 GID4Q8IVV7 300 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 C1orf174Q8IYL3 243 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 OR56B2PQ8NGI1 322 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 OR8J1Q8NGP2 316 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 OR8S1Q8NH09 359 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 CLDND2Q8NHS1 167 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 OTOSQ8NHW6 89 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 RNF133Q8WVZ7 376 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 PIGCQ92535 297 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 SGK3Q96BR1 496 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 RAB39BQ96DA2 213 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 FAHD2AQ96GK7 314 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 MBOAT4Q96T53 435 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 ADAT1Q9BUB4 502 aaKnown RBP4.29□□□□□ -1.72
CHPT1-209ENST00000552329 BEX2Q9BXY8 128 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 KRTAP4-4Q9BYR3 166 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 YIPF3Q9GZM5 350 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 ACOXLQ9NUZ1 547 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 CLN6Q9NWW5 311 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 NDUFA13Q9P0J0 144 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 ATPIF1Q9UII2 106 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 GNG8Q9UK08 70 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 COPS3Q9UNS2 423 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 VPS13CQ709C8 3753 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 NF1P21359 2839 aa4.29□□□□□ -1.72
CHPT1-209ENST00000552329 TANC2Q9HCD6 1990 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 IGHV3OR15-7A0A075B7D8 119 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 A0A0A6YYD4 124 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 IGHV3-35A0A0C4DH35 117 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 LOC100130705A0A1B0GUX0 176 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 A0A1W2PQL4 384 aaPredicted RBP4.28□□□□□ -1.72
CHPT1-209ENST00000552329 DAPL1A0PJW8 107 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 LRRC30A6NM36 301 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 ZNF850A8MQ14 1090 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 LOC110117498-PIK3R3F6TDL0 507 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 XRCC2O43543 280 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 CD5LO43866 347 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 APOC1P02654 83 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 KRT8P05787 483 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 SFTPBP07988 381 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 KITLGP21583 273 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 SLC2A5P22732 501 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 TUBG1P23258 451 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 SAA4P35542 130 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 SRP14P37108 136 aaKnown RBP4.28□□□□□ -1.72
CHPT1-209ENST00000552329 PITPNBP48739 271 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 ARHGDIBP52566 201 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 LCN2P80188 198 aa4.28□□□□□ -1.72
CHPT1-209ENST00000552329 GABPB1Q06547 395 aaPredicted RBP4.28□□□□□ -1.72
CHPT1-209ENST00000552329 LOXL1Q08397 574 aaPredicted RBP4.28□□□□□ -1.72
CHPT1-209ENST00000552329 OR8B8Q15620 311 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms