RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 CT45A1Q5HYN5 189 aa13.34□□□□□ -0.27
BRF1-219ENST00000551787 C9orf152Q5JTZ5 239 aa13.34□□□□□ -0.27
BRF1-219ENST00000551787 SVOPQ8N4V2 548 aa13.34□□□□□ -0.27
BRF1-219ENST00000551787 CT45A3Q8NHU0 189 aa13.34□□□□□ -0.27
BRF1-219ENST00000551787 SETD6Q8TBK2 473 aa13.34□□□□□ -0.27
BRF1-219ENST00000551787 CFHR4Q92496 578 aa13.34□□□□□ -0.27
BRF1-219ENST00000551787 FAM3DQ96BQ1 224 aa13.34□□□□□ -0.27
BRF1-219ENST00000551787 AKR1E2Q96JD6 320 aa13.34□□□□□ -0.27
BRF1-219ENST00000551787 OCSTAMPQ9BR26 566 aa13.34□□□□□ -0.27
BRF1-219ENST00000551787 SMIM30A4D0T7 59 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 FAM90A9PA6NNJ1 464 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 IGKV1D-33P01593 117 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 IGKV1-33P01594 117 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 GAPDHP04406 335 aaKnown RBP13.33□□□□□ -0.28
BRF1-219ENST00000551787 LPLP06858 475 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 VEGFCP49767 419 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 UBE2UQ5VVX9 321 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 C16orf82Q7Z2V1 217 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 OR2W3Q7Z3T1 314 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 OR8H3Q8N146 312 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 ZNF439Q8NDP4 499 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 URM1Q9BTM9 101 aaKnown RBP13.33□□□□□ -0.28
BRF1-219ENST00000551787 CHMP1AQ9HD42 196 aaPredicted RBP13.33□□□□□ -0.28
BRF1-219ENST00000551787 MBNL3Q9NUK0 354 aaKnown RBP13.33□□□□□ -0.28
BRF1-219ENST00000551787 LRRC42Q9Y546 428 aa13.33□□□□□ -0.28
BRF1-219ENST00000551787 IGHV1-3A0A0C4DH29 117 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 TRDV1A0A1B0GX56 115 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 ZNF736B4DX44 427 aaPredicted RBP13.32□□□□□ -0.28
BRF1-219ENST00000551787 MRPS14O60783 128 aaKnown RBP13.32□□□□□ -0.28
BRF1-219ENST00000551787 CSF1P09603 554 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 TMEM11P17152 192 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 PPP1CCP36873 323 aaKnown RBP13.32□□□□□ -0.28
BRF1-219ENST00000551787 TMEM50BP56557 158 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 NSUN5P1Q3KNT7 163 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 MORN2Q502X0 79 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 C22orf42Q6IC83 251 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 TRAT1Q6PIZ9 186 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 Q6ZPA2 131 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 THNSL2Q86YJ6 484 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 LINC00311Q8N616 119 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 ST6GALNAC6Q969X2 333 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 HDHD3Q9BSH5 251 aaPredicted RBP13.32□□□□□ -0.28
BRF1-219ENST00000551787 MMP27Q9H306 513 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 RAB9BQ9NP90 201 aa13.32□□□□□ -0.28
BRF1-219ENST00000551787 A0A0B4J203 849 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 TRAV1-2A0A0B4J238 106 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 TMEM272A0A1B0GTI8 110 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 FBXO24O75426 580 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 PSMD7P51665 324 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 ZNF816Q0VGE8 651 aaPredicted RBP13.31□□□□□ -0.28
BRF1-219ENST00000551787 C2orf68Q2NKX9 166 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 CD200R1LQ6Q8B3 271 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 SLC25A48Q6ZT89 311 aaKnown RBP13.31□□□□□ -0.28
BRF1-219ENST00000551787 FAM89BQ8N5H3 189 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 C8orf31Q8N9H6 132 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 IL1F10Q8WWZ1 152 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 ARHGAP5-AS1Q96IT6 56 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 CITED2Q99967 270 aaPredicted RBP13.31□□□□□ -0.28
BRF1-219ENST00000551787 YTHDF1Q9BYJ9 559 aaKnown RBP13.31□□□□□ -0.28
BRF1-219ENST00000551787 WNT10AQ9GZT5 417 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 AK3Q9UIJ7 227 aa13.31□□□□□ -0.28
BRF1-219ENST00000551787 PDCD5O14737 125 aa13.3□□□□□ -0.28
BRF1-219ENST00000551787 NAPSAO96009 420 aa13.3□□□□□ -0.28
BRF1-219ENST00000551787 MYL9P24844 172 aa13.3□□□□□ -0.28
BRF1-219ENST00000551787 IL3RAP26951 378 aa13.3□□□□□ -0.28
BRF1-219ENST00000551787 ZNF773Q6PK81 442 aa13.3□□□□□ -0.28
BRF1-219ENST00000551787 CENPVQ7Z7K6 275 aaPredicted RBP13.3□□□□□ -0.28
BRF1-219ENST00000551787 OR5AU1Q8NGC0 362 aa13.3□□□□□ -0.28
BRF1-219ENST00000551787 WIPF2Q8TF74 440 aaPredicted RBP13.3□□□□□ -0.28
BRF1-219ENST00000551787 RTN4IP1Q8WWV3 396 aaPredicted RBP13.3□□□□□ -0.28
BRF1-219ENST00000551787 GALMQ96C23 342 aa13.3□□□□□ -0.28
BRF1-219ENST00000551787 EAF1Q96JC9 268 aaPredicted RBP13.3□□□□□ -0.28
BRF1-219ENST00000551787 STEAP1Q9UHE8 339 aa13.3□□□□□ -0.28
BRF1-219ENST00000551787 MOB4Q9Y3A3 225 aa13.3□□□□□ -0.28
BRF1-219ENST00000551787 MEGF8Q7Z7M0 2845 aa13.3□□□□□ -0.28
BRF1-219ENST00000551787 NCBP2LA6PVI3 153 aaKnown RBP13.29□□□□□ -0.28
BRF1-219ENST00000551787 FOXI3A8MTJ6 420 aaPredicted RBP13.29□□□□□ -0.28
BRF1-219ENST00000551787 LDLRAD4O15165 306 aa13.29□□□□□ -0.28
BRF1-219ENST00000551787 HMGN3Q15651 99 aa13.29□□□□□ -0.28
BRF1-219ENST00000551787 TMEM30BQ3MIR4 351 aa13.29□□□□□ -0.28
BRF1-219ENST00000551787 Q3ZCU0 254 aa13.29□□□□□ -0.28
BRF1-219ENST00000551787 PLAC9Q5JTB6 97 aa13.29□□□□□ -0.28
BRF1-219ENST00000551787 C10orf99Q6UWK7 81 aa13.29□□□□□ -0.28
BRF1-219ENST00000551787 NR2C2APQ86WQ0 139 aa13.29□□□□□ -0.28
BRF1-219ENST00000551787 TGIF2LXQ8IUE1 241 aa13.29□□□□□ -0.28
BRF1-219ENST00000551787 PECRQ9BY49 303 aa13.29□□□□□ -0.28
BRF1-219ENST00000551787 ABRACLQ9P1F3 81 aa13.29□□□□□ -0.28
BRF1-219ENST00000551787 RAB22AQ9UL26 194 aa13.29□□□□□ -0.28
BRF1-219ENST00000551787 TET2Q6N021 2002 aaPredicted RBP13.29□□□□□ -0.28
BRF1-219ENST00000551787 IFITM5A6NNB3 132 aa13.28□□□□□ -0.28
BRF1-219ENST00000551787 M0QZK8 103 aa13.28□□□□□ -0.28
BRF1-219ENST00000551787 SLC2A2P11168 524 aaPredicted RBP13.28□□□□□ -0.28
BRF1-219ENST00000551787 RAB3BP20337 219 aa13.28□□□□□ -0.28
BRF1-219ENST00000551787 OR3A3P47888 321 aa13.28□□□□□ -0.28
BRF1-219ENST00000551787 HTD2P86397 168 aa13.28□□□□□ -0.28
BRF1-219ENST00000551787 NEDD8Q15843 81 aa13.28□□□□□ -0.28
BRF1-219ENST00000551787 MOGAT2Q3SYC2 334 aa13.28□□□□□ -0.28
BRF1-219ENST00000551787 ZNF880Q6PDB4 577 aa13.28□□□□□ -0.28
BRF1-219ENST00000551787 ZNF554Q86TJ5 538 aa13.28□□□□□ -0.28
BRF1-219ENST00000551787 C5orf56Q8N8D9 126 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms