RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 CSN3P07498 182 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 OCM2P0CE71 109 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 OCMP0CE72 109 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-222ENST00000551425 ZNF20P17024 532 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 MECP2P51608 486 aaKnown RBP9.02□□□□□ -0.97
PTCH1-222ENST00000551425 TPPP2P59282 170 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 TMEM267Q0VDI3 215 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-222ENST00000551425 LRRC36Q1X8D7 754 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 SSX6Q7RTT6 188 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 LAX1Q8IWV1 398 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 CBR4Q8N4T8 237 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 NPBQ8NG41 125 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 OR2K2Q8NGT1 345 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 ARL11Q969Q4 196 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 FGGYQ96C11 551 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 NEURL2Q9BR09 285 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 TVP23BQ9NYZ1 205 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 MYRFQ9Y2G1 1151 aa9.02□□□□□ -0.97
PTCH1-222ENST00000551425 METTL15A6NJ78 407 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 ORC5O43913 435 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 SULT1C4O75897 302 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 CSTBP04080 98 aaKnown RBP9.01□□□□□ -0.97
PTCH1-222ENST00000551425 ALPLP05186 524 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 TMEM225BP0DP42 221 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 EGR2P11161 476 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-222ENST00000551425 ZNF134P52741 427 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 CRISP1P54107 249 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 CX3CL1P78423 397 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 IL13RA2Q14627 380 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 MOGAT2Q3SYC2 334 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 ACTBL2Q562R1 376 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 CT45A1Q5HYN5 189 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 OGFRL1Q5TC84 451 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-222ENST00000551425 LPCAT4Q643R3 524 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 STEAP3Q658P3 488 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 DEFB125Q8N687 156 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 PACRGLQ8N7B6 248 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 CT45A3Q8NHU0 189 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 MS4A10Q96PG2 267 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 NR1H4Q96RI1 486 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-222ENST00000551425 SLC29A1Q99808 456 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 OVOL2Q9BRP0 275 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 VCXQ9H320 206 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 VCX3BQ9H321 246 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 SRD5A3Q9H8P0 318 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 SLC2A8Q9NY64 477 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 CNOT2Q9NZN8 540 aaKnown RBP9.01□□□□□ -0.97
PTCH1-222ENST00000551425 RNF150Q9ULK6 438 aa9.01□□□□□ -0.97
PTCH1-222ENST00000551425 IGHV3-43A0A0B4J1X8 118 aa9□□□□□ -0.97
PTCH1-222ENST00000551425 TMEM30CPA0ZSE6 113 aa9□□□□□ -0.97
PTCH1-222ENST00000551425 MITFO75030 526 aaPredicted RBP9□□□□□ -0.97
PTCH1-222ENST00000551425 IGHV3-43DP0DP04 118 aa9□□□□□ -0.97
PTCH1-222ENST00000551425 ATF4P18848 351 aaPredicted RBP9□□□□□ -0.97
PTCH1-222ENST00000551425 CD40LGP29965 261 aa9□□□□□ -0.97
PTCH1-222ENST00000551425 SYNJ2BPP57105 145 aa9□□□□□ -0.97
PTCH1-222ENST00000551425 EWSR1Q01844 656 aaKnown RBP eCLIP9□□□□□ -0.97
PTCH1-222ENST00000551425 TNFRSF9Q07011 255 aa9□□□□□ -0.97
PTCH1-222ENST00000551425 AKIRIN2Q53H80 203 aa9□□□□□ -0.97
PTCH1-222ENST00000551425 TMEM244Q5VVB8 128 aa9□□□□□ -0.97
PTCH1-222ENST00000551425 UBALD1Q8TB05 177 aa9□□□□□ -0.97
PTCH1-222ENST00000551425 KCTD12Q96CX2 325 aaKnown RBP9□□□□□ -0.97
PTCH1-222ENST00000551425 RDH12Q96NR8 316 aa9□□□□□ -0.97
PTCH1-222ENST00000551425 DPCDQ9BVM2 203 aaPredicted RBP9□□□□□ -0.97
PTCH1-222ENST00000551425 A3GALT2U3KPV4 340 aa9□□□□□ -0.97
PTCH1-222ENST00000551425 PRKYO43930 277 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 TRGV3P03979 118 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 ISG15P05161 165 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 CD7P09564 240 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 PTGES3Q15185 160 aaKnown RBP8.99□□□□□ -0.97
PTCH1-222ENST00000551425 TMEM30BQ3MIR4 351 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 AADACL4Q5VUY2 407 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 BCDIN3DQ7Z5W3 292 aaKnown RBP8.99□□□□□ -0.97
PTCH1-222ENST00000551425 PPP1R27Q86WC6 154 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 SUMF2Q8NBJ7 301 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 PXT1Q8NFP0 134 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 OR13C9Q8NGT0 318 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 GABARAPL3Q9BY60 117 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 PRRG3Q9BZD7 231 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 RIBC2Q9H4K1 309 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 IFT22Q9H7X7 185 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 DHDHQ9UQ10 334 aa8.99□□□□□ -0.97
PTCH1-222ENST00000551425 A0A0J9YWU9 116 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 A0A1W2PQL4 384 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-222ENST00000551425 ZNF785A8K8V0 405 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 OR11H12B2RN74 326 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 MAGEB3O15480 346 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 NDUFB8O95169 186 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 TFAP2AP05549 437 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 OR2T7P0C7T2 308 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 KISS1Q15726 138 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 TATDN3Q17R31 274 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 PIGYQ3MUY2 71 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 ZIK1Q3SY52 487 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-222ENST00000551425 NXNL2Q5VZ03 156 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 UNQ5815/PRO19632Q6UWF5 114 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 WFDC3Q8IUB2 231 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 TBX5Q99593 518 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 KRTAP4-5Q9BYR2 181 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 WFDC10AQ9H1F0 79 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 SMPD3Q9NY59 655 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms