RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 MEF2BQ02080 365 aaPredicted RBP12.81□□□□□ -0.36
PDE1B-207ENST00000550620 IL11RAQ14626 422 aa12.81□□□□□ -0.36
PDE1B-207ENST00000550620 SSX2Q16385 188 aa12.81□□□□□ -0.36
PDE1B-207ENST00000550620 BSXQ3C1V8 233 aa12.81□□□□□ -0.36
PDE1B-207ENST00000550620 FAM180AQ6UWF9 173 aa12.81□□□□□ -0.36
PDE1B-207ENST00000550620 LHX4Q969G2 390 aa12.81□□□□□ -0.36
PDE1B-207ENST00000550620 RAB24Q969Q5 203 aa12.81□□□□□ -0.36
PDE1B-207ENST00000550620 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
PDE1B-207ENST00000550620 IL36RNQ9UBH0 155 aa12.81□□□□□ -0.36
PDE1B-207ENST00000550620 ERRFI1Q9UJM3 462 aaPredicted RBP12.81□□□□□ -0.36
PDE1B-207ENST00000550620 TIMM9Q9Y5J7 89 aa12.81□□□□□ -0.36
PDE1B-207ENST00000550620 TMEM250H0YL14 139 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 H7BYZ3 331 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 GCGP01275 180 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 CEACAM6P40199 344 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 GALR1P47211 349 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 COL10A1Q03692 680 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 ARL16Q0P5N6 197 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 UNQ6494/PRO21346Q6UXR6 183 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 Q6ZRM9 215 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 C17orf78Q8N4C9 275 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 AGBL5Q8NDL9 886 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 OR5A2Q8NGI9 324 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 ZNF845Q96IR2 970 aaPredicted RBP12.8□□□□□ -0.36
PDE1B-207ENST00000550620 ADGRG7Q96K78 797 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 FGF23Q9GZV9 251 aaPredicted RBP12.8□□□□□ -0.36
PDE1B-207ENST00000550620 RYDENQ9NUL5 291 aaKnown RBP12.8□□□□□ -0.36
PDE1B-207ENST00000550620 LIN7CQ9NUP9 197 aaKnown RBP12.8□□□□□ -0.36
PDE1B-207ENST00000550620 WNT16Q9UBV4 365 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 LAMP3Q9UQV4 416 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 SHANK1Q9Y566 2161 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 XKRY2A2RUG3 117 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 CYTIPO60759 359 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 MDKP21741 143 aaPredicted RBP12.8□□□□□ -0.36
PDE1B-207ENST00000550620 CCNOP22674 350 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 PSMB3P49720 205 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 ELLP55199 621 aaPredicted RBP12.8□□□□□ -0.36
PDE1B-207ENST00000550620 TAF15Q92804 592 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDE1B-207ENST00000550620 TMEM45BQ96B21 275 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 STRADBQ9C0K7 418 aa12.8□□□□□ -0.36
PDE1B-207ENST00000550620 SPTBN5Q9NRC6 3674 aaKnown RBP12.8□□□□□ -0.36
PDE1B-207ENST00000550620 A8MWP6 167 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 NPIPB11E5RHQ5 1161 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 TUBG1P23258 451 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 RAB4BP61018 213 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 IZUMO4Q1ZYL8 232 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 BEND2Q8NDZ0 799 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 APOBEC3DQ96AK3 386 aaPredicted RBP12.79□□□□□ -0.36
PDE1B-207ENST00000550620 ANAPC16Q96DE5 110 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 TP53TG5Q9Y2B4 290 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 LY6G6EA0A0G2JKS1 128 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 FAM90A26D6RGX4 464 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 IGKV1-39P01597 117 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 IGKV1D-39P04432 117 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 SPANXN5Q5MJ07 72 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 C20orf204Q6ZNR8 217 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 CENPVQ7Z7K6 275 aaPredicted RBP12.79□□□□□ -0.36
PDE1B-207ENST00000550620 HAPLN4Q86UW8 402 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 OR51G1Q8NGK1 321 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 OR4C12Q96R67 309 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 TMEM9BQ9NQ34 198 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 U3KQA8 63 aa12.79□□□□□ -0.36
PDE1B-207ENST00000550620 MED12Q93074 2177 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 HS3ST1O14792 307 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 HRASP01112 189 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 CD55P08174 381 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 COX5BP10606 129 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 NDUFB7P17568 137 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 PDLIM4P50479 330 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 RPL23P62829 140 aaKnown RBP12.78□□□□□ -0.36
PDE1B-207ENST00000550620 SLC38A11Q08AI6 406 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 ACOT6Q3I5F7 207 aaPredicted RBP12.78□□□□□ -0.36
PDE1B-207ENST00000550620 ZNF66Q6ZN08 573 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 NECAP1Q8NC96 275 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 TMEM170AQ8WVE7 144 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 LURAP1Q96LR2 239 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 NDUFAF3Q9BU61 184 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 OR51I2Q9H344 312 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 MANBALQ9NQG1 85 aa12.78□□□□□ -0.36
PDE1B-207ENST00000550620 UBE2L5PA0A1B0GUS4 154 aa12.77□□□□□ -0.36
PDE1B-207ENST00000550620 C5orf49A4QMS7 147 aa12.77□□□□□ -0.36
PDE1B-207ENST00000550620 SYNGR1O43759 233 aa12.77□□□□□ -0.36
PDE1B-207ENST00000550620 MRPL33O75394 65 aaKnown RBP12.77□□□□□ -0.36
PDE1B-207ENST00000550620 KLF7O75840 302 aaPredicted RBP12.77□□□□□ -0.36
PDE1B-207ENST00000550620 IGKV1-5P01602 117 aa12.77□□□□□ -0.36
PDE1B-207ENST00000550620 MBP02144 154 aa12.77□□□□□ -0.36
PDE1B-207ENST00000550620 IDH3GP51553 393 aaPredicted RBP12.77□□□□□ -0.36
PDE1B-207ENST00000550620 ERVS71-1P61550 626 aa12.77□□□□□ -0.36
PDE1B-207ENST00000550620 MOB1BQ7L9L4 216 aa12.77□□□□□ -0.36
PDE1B-207ENST00000550620 ZNF573Q86YE8 665 aa12.77□□□□□ -0.36
PDE1B-207ENST00000550620 ABHD3Q8WU67 409 aa12.77□□□□□ -0.36
PDE1B-207ENST00000550620 IL1F10Q8WWZ1 152 aa12.77□□□□□ -0.36
PDE1B-207ENST00000550620 RDH5Q92781 318 aa12.77□□□□□ -0.36
PDE1B-207ENST00000550620 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.36
PDE1B-207ENST00000550620 RBM7Q9Y580 266 aaKnown RBP12.77□□□□□ -0.36
PDE1B-207ENST00000550620 SZT2Q5T011 3432 aa12.77□□□□□ -0.37
PDE1B-207ENST00000550620 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.77□□□□□ -0.37
PDE1B-207ENST00000550620 TRAPPC6AO75865 159 aa12.77□□□□□ -0.37
PDE1B-207ENST00000550620 USF2Q15853 346 aaPredicted RBP12.77□□□□□ -0.37
PDE1B-207ENST00000550620 BEND4Q6ZU67 534 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms