RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 FAM3DQ96BQ1 224 aa13.78□□□□□ -0.2
CHMP1A-208ENST00000550102 FAAP24Q9BTP7 215 aa13.78□□□□□ -0.2
CHMP1A-208ENST00000550102 CHMP1AQ9HD42 196 aaPredicted RBP13.78□□□□□ -0.2
CHMP1A-208ENST00000550102 PLEKHJ1Q9NW61 149 aa13.78□□□□□ -0.2
CHMP1A-208ENST00000550102 STEAP1Q9UHE8 339 aa13.78□□□□□ -0.2
CHMP1A-208ENST00000550102 GAPDHP04406 335 aaKnown RBP13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 LPLP06858 475 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 BLCAPP62952 87 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 DIAPH2-AS1Q14236 149 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 HES1Q14469 280 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 KCTD21Q4G0X4 260 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 HES5Q5TA89 166 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 C22orf42Q6IC83 251 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 FAM53AQ6NSI3 398 aaPredicted RBP13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 SLC25A48Q6ZT89 311 aaKnown RBP13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 THNSL2Q86YJ6 484 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 ZNF439Q8NDP4 499 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 OR2S2Q9NQN1 319 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 JPT1Q9UK76 154 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 MOB4Q9Y3A3 225 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 NOTCH1P46531 2555 aa13.77□□□□□ -0.21
CHMP1A-208ENST00000550102 IGHV1-3A0A0C4DH29 117 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 FAM90A9PA6NNJ1 464 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 SLC31A2O15432 143 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 SOCS1O15524 211 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 TXNL1O43396 289 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 NAPSAO96009 420 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 REG1BP48304 166 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 ZNF137PP52743 207 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 OR10A3P58181 314 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 HMGN3Q15651 99 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 TMEM95Q3KNT9 176 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 FAM89BQ8N5H3 189 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 MMP27Q9H306 513 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 ABRACLQ9P1F3 81 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 HSF4Q9ULV5 492 aa13.76□□□□□ -0.21
CHMP1A-208ENST00000550102 SHISA3A0PJX4 238 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 IFITM5A6NNB3 132 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 FBXO24O75426 580 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 TSPAN15O95858 294 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 TMEM11P17152 192 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 RAB3BP20337 219 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 HTD2P86397 168 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 GNMTQ14749 295 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 ABCA11PQ4W5N1 156 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 STEAP3Q658P3 488 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 Q6ZS46 218 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 MOB3BQ86TA1 216 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 IZUMO1Q8IYV9 350 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 C11orf44Q8N8P7 122 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 OR56B1Q8NGI3 324 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 RTN4IP1Q8WWV3 396 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 ST6GALNAC6Q969X2 333 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 GALMQ96C23 342 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 RIMS4Q9H426 269 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 C12orf4Q9NQ89 552 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 AK3Q9UIJ7 227 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 STUB1Q9UNE7 303 aa13.75□□□□□ -0.21
CHMP1A-208ENST00000550102 TMEM272A0A1B0GTI8 110 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 FOXI3A8MTJ6 420 aaPredicted RBP13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 LDLRAD4O15165 306 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 RGS11O94810 467 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 IGKV1D-33P01593 117 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 IGKV1-33P01594 117 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 FGF9P31371 208 aaPredicted RBP13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 PPP1CCP36873 323 aaKnown RBP13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 VEGFCP49767 419 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 C2orf76Q3KRA6 126 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 MORN2Q502X0 79 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 CT45A1Q5HYN5 189 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 TGIF2LXQ8IUE1 241 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 OR52L2PQ8NGH6 319 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 CT45A3Q8NHU0 189 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 SETD6Q8TBK2 473 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 ABHD14AQ9BUJ0 271 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 WNT10AQ9GZT5 417 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 RAB22AQ9UL26 194 aa13.74□□□□□ -0.21
CHMP1A-208ENST00000550102 TRBV6-6A0A0A6YYG2 114 aa13.73□□□□□ -0.21
CHMP1A-208ENST00000550102 AMY1AP04745 511 aa13.73□□□□□ -0.21
CHMP1A-208ENST00000550102 AMY2AP04746 511 aa13.73□□□□□ -0.21
CHMP1A-208ENST00000550102 CSF1P09603 554 aa13.73□□□□□ -0.21
CHMP1A-208ENST00000550102 ZNF880Q6PDB4 577 aa13.73□□□□□ -0.21
CHMP1A-208ENST00000550102 WIPF2Q8TF74 440 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-208ENST00000550102 IL1F10Q8WWZ1 152 aa13.73□□□□□ -0.21
CHMP1A-208ENST00000550102 ARHGAP5-AS1Q96IT6 56 aa13.73□□□□□ -0.21
CHMP1A-208ENST00000550102 TXNL4BQ9NX01 149 aaKnown RBP13.73□□□□□ -0.21
CHMP1A-208ENST00000550102 MGAT4AQ9UM21 535 aa13.73□□□□□ -0.21
CHMP1A-208ENST00000550102 SSR3Q9UNL2 185 aa13.73□□□□□ -0.21
CHMP1A-208ENST00000550102 IGHV3-72A0A0B4J1Y9 119 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 FGF16O43320 207 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 LANCL1O43813 399 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 YPEL1O60688 119 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 ZNF134P52741 427 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 HLA-DRB3P79483 266 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 HNF4GQ14541 408 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 NEDD8Q15843 81 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 LY6G6FQ5SQ64 297 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 Q6ZPA2 131 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 LYG1Q8N1E2 194 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 C5orf56Q8N8D9 126 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms