RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 IGHV7-81A0A0B4J1V7 117 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 IGHV3-43A0A0B4J1X8 118 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 TRAV41A0A0B4J266 112 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 TRIM64CA6NLI5 447 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 C12orf77C9JDV5 145 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 ARPC1BO15143 372 aaKnown RBP7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 ATP6V0E1O15342 81 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 SPINT2O43291 252 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 ZNF780AO75290 641 aaPredicted RBP7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 IGHV3-43DP0DP04 118 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 SLC2A2P11168 524 aaPredicted RBP7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 CRIP2P52943 208 aaPredicted RBP7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 GBX2P52951 348 aaPredicted RBP7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 MMDQ15546 238 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 MORN2Q502X0 79 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 C19orf54Q5BKX5 351 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 SYT6Q5T7P8 510 aaPredicted RBP7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 LPCAT4Q643R3 524 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 STX19Q8N4C7 294 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 NPBQ8NG41 125 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 UBALD1Q8TB05 177 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 RBMXL1Q96E39 390 aaKnown RBP7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 MRPS24Q96EL2 167 aaKnown RBP7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 RITA1Q96K30 269 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 OR5B12Q96R08 314 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 FAM192AQ9GZU8 254 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 TOLLIPQ9H0E2 274 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 SPACA1Q9HBV2 294 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 ERVK13-1Q9NX77 482 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 ERGIC3Q9Y282 383 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 MRPS28Q9Y2Q9 187 aaKnown RBP7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 SACSQ9NZJ4 4579 aa7.6□□□□□ -1.19
TRAFD1-207ENST00000550051 MCRIP1C9JLW8 97 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 LINC01619G3V211 115 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 AIPO00170 330 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 CA11O75493 328 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 FADS2O95864 444 aaKnown RBP7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 HBZP02008 142 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 ALPLP05186 524 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 CD2P06729 351 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 OR8U9P0C7N5 309 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 GTF2F2P13984 249 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 GABRB1P18505 474 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 VAMP1P23763 118 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 ZNF93P35789 620 aaPredicted RBP7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 SLURP1P55000 103 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 ACTBP60709 375 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 GABPB1Q06547 395 aaPredicted RBP7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 GPR176Q14439 515 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 C5orf64Q2M2E5 130 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 LY6G6FQ5SQ64 297 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 ATAD3CQ5T2N8 411 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 C6orf183Q5T699 404 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 ZNF660Q6AZW8 331 aaPredicted RBP7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 ZFAND6Q6FIF0 208 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 TRAT1Q6PIZ9 186 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 ZNF554Q86TJ5 538 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 LYPD6Q86Y78 171 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 ODF3L1Q8IXM7 274 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 GPR148Q8TDV2 347 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 TSEN15Q8WW01 171 aaKnown RBP7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 EDARADDQ8WWZ3 215 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 S100A13Q99584 98 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 ZNF251Q9BRH9 671 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 ANKRD60Q9BZ19 345 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 MRPS18AQ9NVS2 196 aaKnown RBP7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 TAS2R4Q9NYW5 299 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 RCC2Q9P258 522 aaKnown RBP7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 GNG12Q9UBI6 72 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 TRAPPC2LQ9UL33 140 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 NUBP2Q9Y5Y2 271 aa7.59□□□□□ -1.19
TRAFD1-207ENST00000550051 EPPK1P58107 5090 aaKnown RBP7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 NBR2O15453 112 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 SOX15O60248 233 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 GPX5O75715 221 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 NDUFA3O95167 84 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 GHRHP01286 108 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 HSPB1P04792 205 aaKnown RBP7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 GLAP06280 429 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 LGALS1P09382 135 aaKnown RBP7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 IGHV4-30-4P0DP06 118 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 RCC1P18754 421 aaPredicted RBP7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 SERPINA2P20848 420 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 MYF6P23409 242 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 BLVRBP30043 206 aaPredicted RBP7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 BDKRB2P30411 391 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 SOX2P48431 317 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 GTF2A1P52655 376 aaPredicted RBP7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 RAB40BQ12829 278 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 CCDC58Q4VC31 144 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 CD200R1LQ6Q8B3 271 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 TCTEX1D1Q8N7M0 179 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 OR1L1Q8NH94 360 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 RHOXF1Q8NHV9 184 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 NEK7Q8TDX7 302 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 RGP1Q92546 391 aaPredicted RBP7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 ISOC1Q96CN7 298 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 FLYWCH2Q96CP2 140 aaKnown RBP7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 OR4C12Q96R67 309 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 NABP2Q9BQ15 211 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 277.1 ms