RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 HNF1AP20823 631 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 RPL23AP62750 156 aaKnown RBP9.47□□□□□ -0.89
LINC00661-204ENST00000549354 ARF1P84077 181 aaKnown RBP9.47□□□□□ -0.89
LINC00661-204ENST00000549354 RAB35Q15286 201 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 SURF2Q15527 256 aaPredicted RBP9.47□□□□□ -0.89
LINC00661-204ENST00000549354 TBC1D26Q86UD7 250 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 EGLN1Q9GZT9 426 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 ZNF286AQ9HBT8 521 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 GLRX2Q9NS18 164 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 NOSIPQ9Y314 301 aaKnown RBP9.47□□□□□ -0.89
LINC00661-204ENST00000549354 V9GYS6 101 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 ANKRD11Q6UB99 2663 aaPredicted RBP9.47□□□□□ -0.89
LINC00661-204ENST00000549354 SPG11Q96JI7 2443 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 C3orf85A0A1B0GTC6 90 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 OR6C6A6NF89 314 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 IFITM10A6NMD0 228 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 TMEM50AO95807 157 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 FABP4P15090 132 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 CA6P23280 308 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 TNFSF10P50591 281 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 PLGLB1Q02325 96 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 SLC10A1Q14973 349 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 RNF212Q495C1 297 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 HIKESHIQ53FT3 197 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 ZNF766Q5HY98 468 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 ZNF880Q6PDB4 577 aa9.47□□□□□ -0.89
LINC00661-204ENST00000549354 MRPL21Q7Z2W9 205 aaKnown RBP9.47□□□□□ -0.89
LINC00661-204ENST00000549354 TLN1Q9Y490 2541 aaKnown RBP9.47□□□□□ -0.89
LINC00661-204ENST00000549354 CUBNO60494 3623 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 CHST1O43916 411 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 CEACAM4O75871 244 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 PPYP01298 95 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 WT1P19544 449 aaPredicted RBP9.46□□□□□ -0.89
LINC00661-204ENST00000549354 HMGN3Q15651 99 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 TMEM178AQ8NBL3 297 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 HPSE2Q8WWQ2 592 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 C10orf35Q96D05 121 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 BOD1Q96IK1 185 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 GINS3Q9BRX5 216 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 TMEM204Q9BSN7 226 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 SEBOXQ9HB31 216 aaPredicted RBP9.46□□□□□ -0.89
LINC00661-204ENST00000549354 DLL3Q9NYJ7 618 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 ERRFI1Q9UJM3 462 aaPredicted RBP9.46□□□□□ -0.89
LINC00661-204ENST00000549354 WSB1Q9Y6I7 421 aa9.46□□□□□ -0.89
LINC00661-204ENST00000549354 IGHV2-70P01814 119 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 TGFBR3Q03167 851 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 SPANXN5Q5MJ07 72 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF818PQ6ZRF7 136 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 SDSLQ96GA7 329 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 TM2D1Q9BX74 207 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 IGHV3-43A0A0B4J1X8 118 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF816-ZNF321PA0A0X1KG74 233 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 MPPED1O15442 326 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 RHBDL1O75783 438 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 SYNGR4O95473 234 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 SNRPCP09234 159 aaKnown RBP9.46□□□□□ -0.9
LINC00661-204ENST00000549354 IGHV3-43DP0DP04 118 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 PMP22Q01453 160 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 AKR1C8PQ5T2L2 129 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 CMTM1Q8IZ96 169 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 TMEM252Q8N6L7 170 aa9.46□□□□□ -0.9
LINC00661-204ENST00000549354 LRBAP50851 2863 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 SRSF6Q13247 344 aaKnown RBP9.45□□□□□ -0.9
LINC00661-204ENST00000549354 RNPS1Q15287 305 aaKnown RBP9.45□□□□□ -0.9
LINC00661-204ENST00000549354 RNFT1Q5M7Z0 435 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 WDR25Q64LD2 544 aaPredicted RBP9.45□□□□□ -0.9
LINC00661-204ENST00000549354 UNQ6494/PRO21346Q6UXR6 183 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 SSX9Q7RTT3 188 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 GP6Q9HCN6 339 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 POMT1Q9Y6A1 747 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 K7N7A8 449 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 MMP7P09237 267 aaPredicted RBP9.45□□□□□ -0.9
LINC00661-204ENST00000549354 RNF224P0DH78 156 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 EGR1P18146 543 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 PCBD1P61457 104 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 ERVS71-1P61550 626 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 ARG2P78540 354 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 CLN3Q13286 438 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 HEPN1Q6WQI6 88 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 LYPD6BQ8NI32 183 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 WDYHV1Q96HA8 205 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 SNX22Q96L94 193 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 PLK3Q9H4B4 646 aa9.45□□□□□ -0.9
LINC00661-204ENST00000549354 GAR1Q9NY12 217 aaKnown RBP9.45□□□□□ -0.9
LINC00661-204ENST00000549354 INTS1Q8N201 2190 aaKnown RBP9.45□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF503-AS2A6NEH8 195 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 PPIHO43447 177 aaKnown RBP9.44□□□□□ -0.9
LINC00661-204ENST00000549354 IGHG3P01860 377 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 TK1P04183 234 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 SERPINE2P07093 398 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 SOD3P08294 240 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 RAB5CP51148 216 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 RHEBQ15382 184 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 C20orf204Q6ZNR8 217 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 MEGF10Q96KG7 1140 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 C18orf12Q96KH6 178 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST1H2AAQ96QV6 131 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 SSX3Q99909 188 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 NIPSNAP3BQ9BS92 247 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 VSIRQ9H7M9 311 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms