RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ST8SIA5O15466 376 aa12.14□□□□□ -0.47
CACNB3-209ENST00000548860 SPRY3O43610 288 aa12.14□□□□□ -0.47
CACNB3-209ENST00000548860 DTYMKP23919 212 aa12.14□□□□□ -0.47
CACNB3-209ENST00000548860 SOX8P57073 446 aa12.14□□□□□ -0.47
CACNB3-209ENST00000548860 SSPNQ14714 243 aa12.14□□□□□ -0.47
CACNB3-209ENST00000548860 HMGN3Q15651 99 aa12.14□□□□□ -0.47
CACNB3-209ENST00000548860 VKORC1L1Q8N0U8 176 aa12.14□□□□□ -0.47
CACNB3-209ENST00000548860 FAM89BQ8N5H3 189 aa12.14□□□□□ -0.47
CACNB3-209ENST00000548860 OR2Z1Q8NG97 314 aa12.14□□□□□ -0.47
CACNB3-209ENST00000548860 GNPNAT1Q96EK6 184 aaPredicted RBP12.14□□□□□ -0.47
CACNB3-209ENST00000548860 TOLLIPQ9H0E2 274 aa12.14□□□□□ -0.47
CACNB3-209ENST00000548860 MAP1LC3B2A6NCE7 125 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 DBX1A6NMT0 343 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 FGF16O43320 207 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 SYNGR2O43760 224 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 CD55P08174 381 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 CD63P08962 238 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 FGF7P21781 194 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 PMELP40967 661 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 DCAF10Q5QP82 559 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 PRAMEF5Q5TYX0 476 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 ZNF600Q6ZNG1 722 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 MRPL41Q8IXM3 137 aaKnown RBP12.13□□□□□ -0.47
CACNB3-209ENST00000548860 SELENOHQ8IZQ5 122 aaKnown RBP12.13□□□□□ -0.47
CACNB3-209ENST00000548860 SLC25A40Q8TBP6 338 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 GPR61Q9BZJ8 451 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 MAP1LC3BQ9GZQ8 125 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 PATZ1Q9HBE1 687 aaKnown RBP12.13□□□□□ -0.47
CACNB3-209ENST00000548860 SERTAD4Q9NUC0 356 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 SH2D1BO14796 132 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 FCGR3BO75015 233 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 PGLYRP1O75594 196 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-209ENST00000548860 C10orf128Q5T292 105 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 EIF4E3Q8N5X7 224 aaKnown RBP12.13□□□□□ -0.47
CACNB3-209ENST00000548860 OR1L1Q8NH94 360 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 CHRNA10Q9GZZ6 450 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 RPH3ALQ9UNE2 315 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 DFFBO76075 338 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 SEC11BP0C7V7 166 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 FAM185AQ8N0U4 392 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 ARV1Q9H2C2 271 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 WDR54Q9H977 334 aa12.13□□□□□ -0.47
CACNB3-209ENST00000548860 NUDT19A8MXV4 375 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 H7BYZ3 331 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 DANCRP0C864 163 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 HLA-GP17693 338 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 DEFA6Q01524 100 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 SLC38A11Q08AI6 406 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 RHOVQ96L33 236 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 SF3B5Q9BWJ5 86 aaKnown RBP12.12□□□□□ -0.47
CACNB3-209ENST00000548860 ENY2Q9NPA8 101 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-209ENST00000548860 HBE1P02100 147 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 F2RP25116 425 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 HOXA1P49639 335 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-209ENST00000548860 RAB5CP51148 216 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 ZNF83P51522 516 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 DHRS7BQ6IAN0 325 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-209ENST00000548860 TMEM211Q6ICI0 200 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 BOD1Q96IK1 185 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 VSIRQ9H7M9 311 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 GLRX2Q9NS18 164 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 RPRMQ9NS64 109 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 DLL3Q9NYJ7 618 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 CREBBPQ92793 2442 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 NPIPB13A6NJU9 1138 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 NPIPB4C9JG80 1138 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 GNG10P50151 68 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 PPP1CBP62140 327 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 BTNL8Q6UX41 500 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 LFNGQ8NES3 379 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 SMIM8Q96KF7 97 aa12.12□□□□□ -0.47
CACNB3-209ENST00000548860 ACAA1P09110 424 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-209ENST00000548860 RPS2P15880 293 aaKnown RBP12.11□□□□□ -0.47
CACNB3-209ENST00000548860 ARR3P36575 388 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 H3F3AP84243 136 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 SSMEM1Q8WWF3 244 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 OR2W1Q9Y3N9 320 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 ZNF716A6NP11 495 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 HABP2Q14520 560 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-209ENST00000548860 SSX2Q16385 188 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 DEFB109BQ30KR1 87 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 C20orf204Q6ZNR8 217 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 C15orf54Q8N8G6 183 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 ZNF610Q8N9Z0 462 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 GALMQ96C23 342 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 FAM210BQ96KR6 192 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 GAR1Q9NY12 217 aaKnown RBP12.11□□□□□ -0.47
CACNB3-209ENST00000548860 PLA2G2EQ9NZK7 142 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 ZNF391Q9UJN7 358 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 TP53TG5Q9Y2B4 290 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 AP4M1O00189 453 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 NKX2-8O15522 239 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 EIF3IQ13347 325 aaKnown RBP12.11□□□□□ -0.47
CACNB3-209ENST00000548860 RTP5Q14D33 572 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 FFAR4Q5NUL3 377 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 OR10P1Q8NGE3 313 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 TMEM171Q8WVE6 324 aa12.11□□□□□ -0.47
CACNB3-209ENST00000548860 MSI2Q96DH6 328 aaKnown RBP12.11□□□□□ -0.47
CACNB3-209ENST00000548860 TAAR9Q96RI9 348 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms