RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 RPUSD4Q96CM3 377 aaKnown RBP19.73■□□□□ 0.75
NPAS3-206ENST00000548645 PCGF1Q9BSM1 259 aa19.73■□□□□ 0.75
NPAS3-206ENST00000548645 OR2W1Q9Y3N9 320 aa19.73■□□□□ 0.75
NPAS3-206ENST00000548645 ABCA7Q8IZY2 2146 aa19.73■□□□□ 0.75
NPAS3-206ENST00000548645 CCL3P10147 92 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 CCKARP32238 428 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 ACOT6Q3I5F7 207 aaPredicted RBP19.72■□□□□ 0.75
NPAS3-206ENST00000548645 ADGRG7Q96K78 797 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 RIMS4Q9H426 269 aaPredicted RBP19.72■□□□□ 0.75
NPAS3-206ENST00000548645 ASCC3Q8N3C0 2202 aaKnown RBP19.72■□□□□ 0.75
NPAS3-206ENST00000548645 DNPH1O43598 174 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 IQCJQ1A5X6 159 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 PCSK4Q6UW60 755 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 HAPLN4Q86UW8 402 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 IER2Q9BTL4 223 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 EREGO14944 169 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 NTF4P34130 210 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 PSMB3P49720 205 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 RAC3P60763 192 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 AAED1Q7RTV5 226 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 FGFBP3Q8TAT2 258 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 OR51I2Q9H344 312 aa19.72■□□□□ 0.75
NPAS3-206ENST00000548645 A0A1W2PPQ1 181 aa19.71■□□□□ 0.75
NPAS3-206ENST00000548645 ZNF468Q5VIY5 522 aaPredicted RBP19.71■□□□□ 0.75
NPAS3-206ENST00000548645 TMEM37Q8WXS4 190 aa19.71■□□□□ 0.75
NPAS3-206ENST00000548645 OR4C12Q96R67 309 aa19.71■□□□□ 0.75
NPAS3-206ENST00000548645 LRRC3CA6NJW4 275 aa19.71■□□□□ 0.75
NPAS3-206ENST00000548645 MRPL41Q8IXM3 137 aaKnown RBP19.71■□□□□ 0.75
NPAS3-206ENST00000548645 OR10J5Q8NHC4 309 aa19.71■□□□□ 0.75
NPAS3-206ENST00000548645 ANAPC16Q96DE5 110 aa19.71■□□□□ 0.75
NPAS3-206ENST00000548645 HS3ST6Q96QI5 342 aa19.71■□□□□ 0.75
NPAS3-206ENST00000548645 G3V3Y1 287 aa19.7■□□□□ 0.74
NPAS3-206ENST00000548645 BTF3P20290 206 aaKnown RBP19.7■□□□□ 0.74
NPAS3-206ENST00000548645 PAX5Q02548 391 aa19.7■□□□□ 0.74
NPAS3-206ENST00000548645 CEACAM16Q2WEN9 425 aa19.7■□□□□ 0.74
NPAS3-206ENST00000548645 ACTL10Q5JWF8 245 aa19.7■□□□□ 0.74
NPAS3-206ENST00000548645 ZNF324BQ6AW86 544 aaPredicted RBP19.7■□□□□ 0.74
NPAS3-206ENST00000548645 TAF15Q92804 592 aaKnown RBP eCLIP19.7■□□□□ 0.74
NPAS3-206ENST00000548645 CLDN23Q96B33 292 aa19.7■□□□□ 0.74
NPAS3-206ENST00000548645 C1QTNF5Q9BXJ0 243 aa19.7■□□□□ 0.74
NPAS3-206ENST00000548645 FUT9Q9Y231 359 aa19.7■□□□□ 0.74
NPAS3-206ENST00000548645 LRP5LA4QPB2 252 aa19.7■□□□□ 0.74
NPAS3-206ENST00000548645 WNT2P09544 360 aa19.7■□□□□ 0.74
NPAS3-206ENST00000548645 MRPL30Q8TCC3 161 aaKnown RBP19.7■□□□□ 0.74
NPAS3-206ENST00000548645 PCED1AQ9H1Q7 454 aa19.7■□□□□ 0.74
NPAS3-206ENST00000548645 C2CD4DB7Z1M9 353 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 OR2T10Q8NGZ9 312 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 ELOVL1Q9BW60 279 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 PRDM14Q9GZV8 571 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 PARLQ9H300 379 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 PROK2Q9HC23 129 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 ERRFI1Q9UJM3 462 aaPredicted RBP19.69■□□□□ 0.74
NPAS3-206ENST00000548645 B4E171 279 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 TRAPPC2LH3BP13 241 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 TSPAN7P41732 249 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 TNFRSF9Q07011 255 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 RPP25LQ8N5L8 163 aaKnown RBP19.69■□□□□ 0.74
NPAS3-206ENST00000548645 TMEM68Q96MH6 324 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 IL36RNQ9UBH0 155 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 CELA2AP08217 269 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 PRDX4Q13162 271 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 HNF4GQ14541 408 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 MKXQ8IYA7 352 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 CISD2Q8N5K1 135 aaKnown RBP19.69■□□□□ 0.74
NPAS3-206ENST00000548645 OR56B2PQ8NGI1 322 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 TIMM9Q9Y5J7 89 aa19.69■□□□□ 0.74
NPAS3-206ENST00000548645 CHD3Q12873 2000 aaKnown RBP19.68■□□□□ 0.74
NPAS3-206ENST00000548645 GPM6AP51674 278 aa19.68■□□□□ 0.74
NPAS3-206ENST00000548645 PCOLCEQ15113 449 aa19.68■□□□□ 0.74
NPAS3-206ENST00000548645 CLEC12BQ2HXU8 276 aa19.68■□□□□ 0.74
NPAS3-206ENST00000548645 OR6C3Q9NZP0 311 aa19.68■□□□□ 0.74
NPAS3-206ENST00000548645 GGCTO75223 188 aaKnown RBP19.68■□□□□ 0.74
NPAS3-206ENST00000548645 IGKV1-39P01597 117 aa19.68■□□□□ 0.74
NPAS3-206ENST00000548645 IGKV1D-39P04432 117 aa19.68■□□□□ 0.74
NPAS3-206ENST00000548645 FGF5P12034 268 aa19.68■□□□□ 0.74
NPAS3-206ENST00000548645 SPANXN5Q5MJ07 72 aa19.68■□□□□ 0.74
NPAS3-206ENST00000548645 UBE2L5PA0A1B0GUS4 154 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 CBR3O75828 277 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 TYMSP04818 313 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 OR4A8P0C604 315 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 HOXA6P31267 233 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 SRP14P37108 136 aaKnown RBP19.67■□□□□ 0.74
NPAS3-206ENST00000548645 RTP5Q14D33 572 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 TESK1Q15569 626 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 MTCH1Q9NZJ7 389 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 KIAA1549Q9HCM3 1950 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 ZNF716A6NP11 495 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 CARD18P57730 90 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 RIPPLY2Q5TAB7 128 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 CABIN1Q9Y6J0 2220 aa19.67■□□□□ 0.74
NPAS3-206ENST00000548645 CYC1P08574 325 aa19.66■□□□□ 0.74
NPAS3-206ENST00000548645 SLC38A11Q08AI6 406 aa19.66■□□□□ 0.74
NPAS3-206ENST00000548645 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.66■□□□□ 0.74
NPAS3-206ENST00000548645 OR10V1Q8NGI7 309 aa19.66■□□□□ 0.74
NPAS3-206ENST00000548645 SNHG12Q9BXW3 62 aa19.66■□□□□ 0.74
NPAS3-206ENST00000548645 TRBV6-6A0A0A6YYG2 114 aa19.66■□□□□ 0.74
NPAS3-206ENST00000548645 IGKV1D-33P01593 117 aa19.66■□□□□ 0.74
NPAS3-206ENST00000548645 IGKV1-33P01594 117 aa19.66■□□□□ 0.74
NPAS3-206ENST00000548645 ATG101Q9BSB4 218 aa19.66■□□□□ 0.74
NPAS3-206ENST00000548645 MANBALQ9NQG1 85 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms