RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 IGLV2-14P01704 120 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 IGHV3-9P01782 118 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 METTL15P1P0C7V9 234 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 CCL4P13236 92 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 FABP4P15090 132 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 GDF1P27539 372 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 PKIAP61925 76 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 ARL16Q0P5N6 197 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 PDZD11Q5EBL8 140 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 WDR25Q64LD2 544 aaPredicted RBP8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 SLC23A3Q6PIS1 610 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 SSX7Q7RTT5 188 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 HAPLN4Q86UW8 402 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 ZNF573Q86YE8 665 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 OR5P3Q8WZ94 311 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 C14orf144Q96I85 54 aa8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 ZNF552Q9H707 407 aaPredicted RBP8.4□□□□□ -1.06
SMARCD1-205ENST00000548573 MAP1LC3B2A6NCE7 125 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 FAM90A26D6RGX4 464 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 HS3ST1O14792 307 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 NDUFS6O75380 124 aaKnown RBP8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 LILRB2Q8N423 598 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 OR10A7Q8NGE5 316 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 OR5R1Q8NH85 324 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 S100PBPQ96BU1 408 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 PACRGQ96M98 296 aaPredicted RBP8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 PYGO2Q9BRQ0 406 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 PRRG4Q9BZD6 226 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 PKIBQ9C010 78 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 MAP1LC3BQ9GZQ8 125 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 SRD5A3Q9H8P0 318 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 FSCN3Q9NQT6 498 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 DEPPQ9NTK1 212 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 LIN7CQ9NUP9 197 aaKnown RBP8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 DLL3Q9NYJ7 618 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 NAT8Q9UHE5 227 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 TIMM9Q9Y5J7 89 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 MPC1Q9Y5U8 109 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 A0A096LPE4 126 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 A0A1W2PPZ6 126 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 CEBPZOSA8MTT3 80 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 TSTD3H0UI37 97 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 IGKV1-5P01602 117 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 PGA5P0DJD9 388 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 IAPPP10997 89 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 CCL2P13500 99 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 APLNRP35414 380 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 ARR3P36575 388 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 FGF8P55075 233 aaPredicted RBP8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 SSTP61278 116 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 GNG3P63215 75 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 Q0VFX4 171 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 GAMTQ14353 236 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 IZUMO4Q1ZYL8 232 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 CYP2G1PQ6ZSU1 146 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 MOB1BQ7L9L4 216 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 PPP1R32Q7Z5V6 425 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 CENPVQ7Z7K6 275 aaPredicted RBP8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 TMEM183AQ8IXX5 376 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 FAM58AQ8N1B3 248 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 RDH5Q92781 318 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 HIST1H2BLQ99880 126 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 UBE2ZQ9H832 354 aaPredicted RBP8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 UFSP2Q9NUQ7 469 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 PILRBQ9UKJ0 227 aa8.39□□□□□ -1.07
SMARCD1-205ENST00000548573 CACNA1EQ15878 2313 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 SMCO3A2RU48 225 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 ANKRD30BLA7E2S9 258 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 ZNF737O75373 536 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 CYB561P49447 251 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 CLN3Q13286 438 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 ZNF585BQ52M93 769 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 C4orf17Q53FE4 359 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 NCR3LG1Q68D85 454 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 REC114Q7Z4M0 266 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 TGIF2LYQ8IUE0 185 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 OR4X1Q8NH49 305 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 RNASEH2CQ8TDP1 164 aaKnown RBP8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 TAF15Q92804 592 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 POM121L2Q96KW2 1035 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 OR4C12Q96R67 309 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 SSX3Q99909 188 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 RBKSQ9H477 322 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 TMEM9BQ9NQ34 198 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 OR1A1Q9P1Q5 309 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 PINLYPA6NC86 204 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 TMEM250H0YL14 139 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 DVL1O14640 695 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 KBTBD11O94819 623 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 LY86O95711 162 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 NGFP01138 241 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 PFN1P07737 140 aaKnown RBP8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 PAX1P15863 534 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 DDTP30046 118 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 MEF2BQ02080 365 aaPredicted RBP8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 TESK1Q15569 626 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 TMEM241Q24JQ0 296 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 COA6Q5JTJ3 125 aaKnown RBP8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 IL1F10Q8WWZ1 152 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 SNX22Q96L94 193 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms