RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 R3HDM4Q96D70 268 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 OR2D2Q9H210 308 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 STAG3L3P0CL85 134 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 GZMHP20718 246 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 RNPS1Q15287 305 aaKnown RBP11.19□□□□□ -0.62
PTCH1-212ENST00000546744 OR5A2Q8NGI9 324 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 LSM10Q969L4 123 aaKnown RBP11.19□□□□□ -0.62
PTCH1-212ENST00000546744 C5orf66Q9H5L9 145 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 COA4Q9NYJ1 87 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 MRPS2Q9Y399 296 aaKnown RBP11.19□□□□□ -0.62
PTCH1-212ENST00000546744 KNL1Q8NG31 2342 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 NPIPB7O75200 414 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 CRYAAP02489 173 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 ZNF32P17041 273 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 EPHA8P29322 1005 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-212ENST00000546744 ACSM6Q6P461 480 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 CCL28Q9NRJ3 127 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 KLK2P20151 261 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 CBLN3Q6UW01 205 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 OR4P4Q8NGL7 312 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 OR4C12Q96R67 309 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 CHODLQ9H9P2 273 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 J3QT63 122 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 AMY1AP04745 511 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
PTCH1-212ENST00000546744 ERGP11308 486 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 CXCL12P48061 93 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 SELENOTP62341 195 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 SPPL3Q8TCT6 385 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 RHBDD1Q8TEB9 315 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 TMEM230Q96A57 120 aa11.18□□□□□ -0.62
PTCH1-212ENST00000546744 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.17□□□□□ -0.62
PTCH1-212ENST00000546744 LIPFP07098 398 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 RNF224P0DH78 156 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 CD1BP29016 333 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 BTCP35070 178 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 CA7P43166 264 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 LGALS4P56470 323 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 DECR2Q9NUI1 292 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 PRR13Q9NZ81 148 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 CD207Q9UJ71 328 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 C2orf68Q2NKX9 166 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 FNDC7Q5VTL7 733 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 YRDCQ86U90 279 aaKnown RBP11.17□□□□□ -0.62
PTCH1-212ENST00000546744 H1FXQ92522 213 aaKnown RBP11.17□□□□□ -0.62
PTCH1-212ENST00000546744 SLX1AQ9BQ83 275 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 QTRT1Q9BXR0 403 aaKnown RBP11.17□□□□□ -0.62
PTCH1-212ENST00000546744 THSD7BQ9C0I4 1608 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 TMEM14DPA8MWL7 114 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 KLF4O43474 513 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 KLF7O75840 302 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-212ENST00000546744 C1QL1O75973 258 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 LINC00869P0C866 280 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 NPY1RP25929 384 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 RAC3P60763 192 aa11.17□□□□□ -0.62
PTCH1-212ENST00000546744 DPRXA6NFQ7 191 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 CT62P0C5K7 136 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 LSM11P83369 360 aaKnown RBP eCLIP11.16□□□□□ -0.62
PTCH1-212ENST00000546744 SIGLEC14Q08ET2 396 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 MRGPRFQ96AM1 343 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 ALKBH3Q96Q83 286 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-212ENST00000546744 CDX2Q99626 313 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-212ENST00000546744 CYR61O00622 381 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 S1PR2O95136 353 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 TCL1AP56279 114 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 RBM11P57052 281 aaKnown RBP11.16□□□□□ -0.62
PTCH1-212ENST00000546744 PPP1CAP62136 330 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 CTAG1AP78358 180 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 OTPQ5XKR4 325 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 SCGB1D4Q6XE38 83 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 OR2J1Q9GZK6 312 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 A0A1B0GW64 132 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 LMO7DNF2Z398 122 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 FGF5P12034 268 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 OPRK1P41145 380 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 RUNX1Q01196 453 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 RBPJQ06330 500 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 TMEM170AQ8WVE7 144 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 MIA3Q5JRA6 1907 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 TRBV24-1A0A075B6N3 115 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 IGHV3-20A0A0C4DH32 117 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 SPTY2D1-AS1A0A0U1RR47 76 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 H3BMH7 237 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 NDUFB4O95168 129 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 IBA57Q5T440 356 aaKnown RBP11.16□□□□□ -0.62
PTCH1-212ENST00000546744 SCCPDHQ8NBX0 429 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 SPSB4Q96A44 273 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 WDYHV1Q96HA8 205 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 C6orf106Q9H6K1 298 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-212ENST00000546744 THYN1Q9P016 225 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 FBLN5Q9UBX5 448 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 PSG11Q9UQ72 335 aa11.16□□□□□ -0.62
PTCH1-212ENST00000546744 NRG2O14511 850 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-212ENST00000546744 MLF2Q15773 248 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-212ENST00000546744 C5orf17Q8NAS9 161 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 PCOLCE2Q9UKZ9 415 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 G3V3Y1 287 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 SOD3P08294 240 aa11.15□□□□□ -0.62
PTCH1-212ENST00000546744 S100A4P26447 101 aaKnown RBP11.15□□□□□ -0.62
PTCH1-212ENST00000546744 SRD5A2P31213 254 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms