RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 SURF2Q15527 256 aaPredicted RBP13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 TMEM249Q2WGJ8 235 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 METTL11BQ5VVY1 283 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 GLCCI1Q86VQ1 547 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 FGFRL1Q8N441 504 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 OR4C16Q8NGL9 310 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 OR6F1Q8NGZ6 308 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 SCGB3A2Q96PL1 93 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 SLC25A21Q9BQT8 299 aaPredicted RBP13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 HRASLSQ9HDD0 168 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 GFOD1Q9NXC2 390 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 INSIG2Q9Y5U4 225 aa13.17□□□□□ -0.3
PRPF40A-212ENST00000545856 ABCA1O95477 2261 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 PTTG1O95997 202 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 RAB7AP51149 207 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 LOXL3P58215 753 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 TSPAN5P62079 268 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 LCN2P80188 198 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 LPCAT3Q6P1A2 487 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 H1FOOQ8IZA3 346 aaPredicted RBP13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 WFDC11Q8NEX6 87 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 OR1L1Q8NH94 360 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 MAFIPQ8WZ33 124 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 TMEM186Q96B77 213 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 HEXA-AS1Q9H8Q6 139 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 OR2S2Q9NQN1 319 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 GNG12Q9UBI6 72 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 TEX15Q9BXT5 2789 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 ARHGAP32A7KAX9 2087 aa13.16□□□□□ -0.3
PRPF40A-212ENST00000545856 ZANQ9Y493 2812 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 IGKV1-6A0A0C4DH72 117 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 SDCBPO00560 298 aaPredicted RBP13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 AMY2AP04746 511 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 RFX2P48378 723 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 PAX8Q06710 450 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 PLA1AQ53H76 456 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 IGSF11Q5DX21 431 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 ZNF660Q6AZW8 331 aaPredicted RBP13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 SPNS3Q6ZMD2 512 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 LHFPL1Q86WI0 220 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 C11orf42Q8N5U0 333 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 LINC00311Q8N616 119 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 OR13D1Q8NGV5 346 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 ZNF596Q8TC21 504 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 IL1F10Q8WWZ1 152 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 CYYR1Q96J86 154 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 TMEM133Q9H2Q1 129 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 OR2W1Q9Y3N9 320 aa13.15□□□□□ -0.3
PRPF40A-212ENST00000545856 OTOGQ6ZRI0 2925 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 BET1O15155 118 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 PLA2G10O15496 165 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 PMP2P02689 132 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 CCL3L1P16619 93 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 UCP3P55916 312 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 HERV-K104P61576 105 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 RBMS2Q15434 407 aaKnown RBP13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 DCAF12L2Q5VW00 463 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 CYB5R2Q6BCY4 276 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 PRR18Q8N4B5 295 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 MINDY2Q8NBR6 621 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 OR2AK2Q8NG84 335 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 OR9G1Q8NH87 305 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 TERB2Q8NHR7 220 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 CREB3L1Q96BA8 519 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 MOB3AQ96BX8 217 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 ZNF486Q96H40 463 aaPredicted RBP13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 TINAGL1Q9GZM7 467 aaPredicted RBP13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 SIRPDQ9H106 197 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 ONECUT1Q9UBC0 465 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 ZNF69Q9UC07 566 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 TBC1D24Q9ULP9 559 aa13.14□□□□□ -0.31
PRPF40A-212ENST00000545856 TRAV39A0A0B4J263 110 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 ZNF735P0CB33 412 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 SLC6A1P30531 599 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 FCGR2CP31995 323 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 CEACAM6P40199 344 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 IFITM3Q01628 133 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 MORN2Q502X0 79 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 FAM71F2Q6NXP2 309 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 ZNF782Q6ZMW2 699 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 BEND2Q8NDZ0 799 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 DPAGT1Q9H3H5 408 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 MCUBQ9NWR8 336 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 RDH8Q9NYR8 311 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 GAB2Q9UQC2 676 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 AKAP9Q99996 3911 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 TLN2Q9Y4G6 2542 aa13.13□□□□□ -0.31
PRPF40A-212ENST00000545856 M0QYG6 137 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 PPYP01298 95 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 IGHV4-31P0DP07 118 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 MMP9P14780 707 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 LUMP51884 338 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 BPIFB3P59826 476 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 RGS21Q2M5E4 152 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 PRAMEF5Q5TYX0 476 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 ZDHHC22Q8N966 263 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 POC5Q8NA72 575 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 ZBTB34Q8NCN2 500 aa13.12□□□□□ -0.31
PRPF40A-212ENST00000545856 DUSP18Q8NEJ0 188 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms