RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 PARVAQ9NVD7 372 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 NECAP2Q9NVZ3 263 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 RBM22Q9NW64 420 aaKnown RBP eCLIP2.62□□□□□ -1.995e-10■■■□□ 18.3
SNHG1-222ENST00000545308 MRM2Q9UI43 246 aaKnown RBP2.62□□□□□ -1.99
SNHG1-222ENST00000545308 CELA1Q9UNI1 258 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 GMEB1Q9Y692 573 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 CADP27708 2225 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 HRNRQ86YZ3 2850 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-222ENST00000545308 IGLV3-12A0A075B6K2 115 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 H7C2Y5 167 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 LIN7AO14910 233 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-222ENST00000545308 SNAI2O43623 268 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 SERPINB7O75635 380 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 COX6A1P12074 109 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 CD9P21926 228 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 OPRM1P35372 400 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 MAXP61244 160 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 PPP1CAP62136 330 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 SLC35A1P78382 337 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 CDK5Q00535 292 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 PLGLB1Q02325 96 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 LOXL1Q08397 574 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-222ENST00000545308 FAM53BQ14153 422 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 PRSS8Q16651 343 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF658BQ4V348 819 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-222ENST00000545308 ACTL10Q5JWF8 245 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 TSPO2Q5TGU0 170 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 STEAP4Q687X5 459 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 RTL4Q6ZR62 310 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 FAM19A1Q7Z5A9 133 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 NT5DC3Q86UY8 548 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 PHF13Q86YI8 300 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF786Q8N393 782 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 TMEM156Q8N614 296 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 UBAC2Q8NBM4 344 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 OR5W2Q8NH69 310 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 RXFP4Q8TDU9 374 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 SRSF12Q8WXF0 261 aaKnown RBP2.61□□□□□ -1.99
SNHG1-222ENST00000545308 KCNS1Q96KK3 526 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF75AQ96N20 296 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 CAMK2N2Q96S95 79 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 CYTH2Q99418 400 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 ASB8Q9H765 288 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 TRIM45Q9H8W5 580 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-222ENST00000545308 TMEM100Q9NV29 134 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 ANAPC11Q9NYG5 84 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 PSG11Q9UQ72 335 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 SIGLEC7Q9Y286 467 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 NOTCH1P46531 2555 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 FREM1Q5H8C1 2179 aa2.61□□□□□ -1.99
SNHG1-222ENST00000545308 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.6□□□□□ -1.992e-20■■■■■ 81.8
SNHG1-222ENST00000545308 MED12Q93074 2177 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 A8MU10 97 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 NDUFC2-KCTD14E9PQ53 114 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 TNFRSF11BO00300 401 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 SOCS1O15524 211 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 GATCO43716 136 aaKnown RBP2.6□□□□□ -1.99
SNHG1-222ENST00000545308 SLC22A5O76082 557 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 YIF1AO95070 293 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 EPPINO95925 133 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 PTHP01270 115 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 OR5AL1P0C617 328 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 DNAH10OSP0CZ25 163 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 NQO2P16083 231 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 UGT2B7P16662 529 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 CXCR1P25024 350 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 PAX6P26367 422 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 PCK1P35558 622 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 TALDO1P37837 337 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 GABRA4P48169 554 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 RELAQ04206 551 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 C2orf54Q08AI8 447 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 SYCNQ0VAF6 134 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 PIGHQ14442 188 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-222ENST00000545308 PDK2Q15119 407 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 Q6ZR03 302 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 SHISA6Q6ZSJ9 500 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 SLC16A13Q7RTY0 426 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 WDFY1Q8IWB7 410 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 SELENOHQ8IZQ5 122 aaKnown RBP2.6□□□□□ -1.99
SNHG1-222ENST00000545308 CA13Q8N1Q1 262 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF645Q8N7E2 425 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 ZFP62Q8NB50 900 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-222ENST00000545308 PLPP5Q8NEB5 264 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 JOSD2Q8TAC2 188 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 NELFBQ8WX92 580 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 GHSRQ92847 366 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 RERGQ96A58 199 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-222ENST00000545308 CCDC124Q96CT7 223 aaKnown RBP2.6□□□□□ -1.99
SNHG1-222ENST00000545308 NEURL3Q96EH8 262 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 ADTRPQ96IZ2 230 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF488Q96MN9 340 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 FOPNLQ96NB1 174 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 ZFP3Q96NJ6 502 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 PPP1R2P1Q96PQ5 205 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 ALS2CR12Q96Q35 445 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 CCL19Q99731 98 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 EBNA1BP2Q99848 306 aaKnown RBP2.6□□□□□ -1.99
SNHG1-222ENST00000545308 SULT4A1Q9BR01 284 aa2.6□□□□□ -1.99
SNHG1-222ENST00000545308 GGTLC1Q9BX51 225 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms