RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 S100GP29377 79 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 BCAP31P51572 246 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 LUMP51884 338 aaPredicted RBP11.38□□□□□ -0.59
SCARB1-209ENST00000545305 UBE2MP61081 183 aaKnown RBP11.38□□□□□ -0.59
SCARB1-209ENST00000545305 ZNF273Q14593 569 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 GNMTQ14749 295 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 C17orf58Q2M2W7 97 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 C11orf91Q3C1V1 193 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 C4orf46Q504U0 113 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 CD276Q5ZPR3 534 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 TMEM200BQ69YZ2 307 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 C11orf88Q6PI97 169 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 OR10A7Q8NGE5 316 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 OR10V1Q8NGI7 309 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 C10orf105Q8TEF2 133 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 SECTM1Q8WVN6 248 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 ALX4Q9H161 411 aaPredicted RBP11.38□□□□□ -0.59
SCARB1-209ENST00000545305 GPR132Q9UNW8 380 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 KIAA2026Q5HYC2 2103 aa11.38□□□□□ -0.59
SCARB1-209ENST00000545305 HELZ2Q9BYK8 2649 aaKnown RBP11.38□□□□□ -0.59
SCARB1-209ENST00000545305 IGHV3-43A0A0B4J1X8 118 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 A0A0B4J293 547 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 IGHV2-5P01817 119 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 OR4E1P0C645 316 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 IGHV3-43DP0DP04 118 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 AKR1C4P17516 323 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 NFYBP25208 207 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 PPP1CCP36873 323 aaKnown RBP11.37□□□□□ -0.59
SCARB1-209ENST00000545305 KRTAP10-9P60411 292 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 CBX3Q13185 183 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 PRAMEF5Q5TYX0 476 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 FAHD2BQ6P2I3 314 aaPredicted RBP11.37□□□□□ -0.59
SCARB1-209ENST00000545305 GLDNQ6ZMI3 551 aaPredicted RBP11.37□□□□□ -0.59
SCARB1-209ENST00000545305 SLC25A42Q86VD7 318 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 CCDC71LQ8N9Z2 235 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 OR52M1Q8NGK5 317 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 CLDND2Q8NHS1 167 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 C8orf46Q8TAG6 207 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 FAM216AQ8WUB2 273 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 EDARADDQ8WWZ3 215 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 FAHD2AQ96GK7 314 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 ZNF486Q96H40 463 aaPredicted RBP11.37□□□□□ -0.59
SCARB1-209ENST00000545305 TOLLIPQ9H0E2 274 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 LINC00574Q9H8X3 128 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 RPUSD1Q9UJJ7 312 aaKnown RBP11.37□□□□□ -0.59
SCARB1-209ENST00000545305 KCNS2Q9ULS6 477 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 DSCAML1Q8TD84 2053 aa11.37□□□□□ -0.59
SCARB1-209ENST00000545305 UTP20O75691 2785 aaKnown RBP11.37□□□□□ -0.59
SCARB1-209ENST00000545305 LOC105371242A0A075B767 164 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 PPIAL4CA0A0B4J2A2 164 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 C7orf66A4D0T2 115 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 CREBL2O60519 120 aaPredicted RBP11.36□□□□□ -0.59
SCARB1-209ENST00000545305 YPEL1O60688 119 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 PPIAL4GP0DN37 164 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 VSIG10L2P0DP72 767 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 CCL3L1P16619 93 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 PI3P19957 117 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 OMGP23515 440 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 DEFB113Q30KQ7 82 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 HIST2H2BCQ6DN03 193 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 ADAD2Q8NCV1 583 aaKnown RBP11.36□□□□□ -0.59
SCARB1-209ENST00000545305 YPEL2Q96QA6 119 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 SEC22CQ9BRL7 303 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 RSRP1Q9BUV0 290 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 OR51J1Q9H342 316 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 C5orf66Q9H5L9 145 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 GFOD1Q9NXC2 390 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 DCHS2Q6V1P9 2916 aa11.36□□□□□ -0.59
SCARB1-209ENST00000545305 A0A0A6YYJ9 748 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 IGKV1D-13A0A0B4J2D9 117 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 hCG_1809904A0A1W2PP81 198 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 A0A1W2PPE2 198 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 A0A1W2PR64 198 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 A0A1W2PRV1 198 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 SNRPGP15A8MWD9 76 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 GPR31O00270 319 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 HSD17B6O14756 317 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 PHF1O43189 567 aaPredicted RBP11.35□□□□□ -0.59
SCARB1-209ENST00000545305 SSNA1O43805 119 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 HLA-AP01891 365 aaKnown RBP11.35□□□□□ -0.59
SCARB1-209ENST00000545305 LIPFP07098 398 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 IGKV1-13P0DP09 117 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 SLC25A16P16260 332 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 VAMP1P23763 118 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 PIGPP57054 158 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 CLEC12BQ2HXU8 276 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 PHLDA2Q53GA4 152 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 TMEM128Q5BJH2 165 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 HEPN1Q6WQI6 88 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 LYG2Q86SG7 212 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 CMTM1Q8IZ96 169 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 CADM3Q8N126 398 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 LRRC75A-AS1Q8N1F1 130 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 OR2AK2Q8NG84 335 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 CAPSLQ8WWF8 208 aa11.35□□□□□ -0.59
SCARB1-209ENST00000545305 RTBDNQ9BSG5 229 aaPredicted RBP11.35□□□□□ -0.59
SCARB1-209ENST00000545305 TEX13DA0A0J9YY54 714 aaPredicted RBP11.34□□□□□ -0.59
SCARB1-209ENST00000545305 VWC2LB2RUY7 222 aa11.34□□□□□ -0.59
SCARB1-209ENST00000545305 ENSAO43768 121 aaKnown RBP11.34□□□□□ -0.59
SCARB1-209ENST00000545305 SLC22A5O76082 557 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms