RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 TMEM191AQ9H0A3 160 aa5□□□□□ -1.61
VPS50-220ENST00000544910 HIF1ANQ9NWT6 349 aa5□□□□□ -1.61
VPS50-220ENST00000544910 TREM2Q9NZC2 230 aa5□□□□□ -1.61
VPS50-220ENST00000544910 FCN1O00602 326 aa5□□□□□ -1.61
VPS50-220ENST00000544910 HAND1O96004 215 aa5□□□□□ -1.61
VPS50-220ENST00000544910 KLK2P20151 261 aa5□□□□□ -1.61
VPS50-220ENST00000544910 SLC38A11Q08AI6 406 aa5□□□□□ -1.61
VPS50-220ENST00000544910 GUCA2BQ16661 112 aa5□□□□□ -1.61
VPS50-220ENST00000544910 ALKBH6Q3KRA9 238 aa5□□□□□ -1.61
VPS50-220ENST00000544910 PPP1R32Q7Z5V6 425 aa5□□□□□ -1.61
VPS50-220ENST00000544910 MDP1Q86V88 176 aa5□□□□□ -1.61
VPS50-220ENST00000544910 SNX22Q96L94 193 aa5□□□□□ -1.61
VPS50-220ENST00000544910 IMMP1LQ96LU5 166 aa5□□□□□ -1.61
VPS50-220ENST00000544910 WFIKKN1Q96NZ8 548 aa5□□□□□ -1.61
VPS50-220ENST00000544910 ATG101Q9BSB4 218 aa5□□□□□ -1.61
VPS50-220ENST00000544910 DECR2Q9NUI1 292 aa5□□□□□ -1.61
VPS50-220ENST00000544910 J3QT63 122 aa5□□□□□ -1.61
VPS50-220ENST00000544910 DVL1O14640 695 aa5□□□□□ -1.61
VPS50-220ENST00000544910 GPR37O15354 613 aa5□□□□□ -1.61
VPS50-220ENST00000544910 SIGLEC5O15389 551 aa5□□□□□ -1.61
VPS50-220ENST00000544910 SIAH2O43255 324 aa5□□□□□ -1.61
VPS50-220ENST00000544910 EFNA2O43921 213 aa5□□□□□ -1.61
VPS50-220ENST00000544910 ZNF737O75373 536 aa5□□□□□ -1.61
VPS50-220ENST00000544910 LYZL6O75951 148 aa5□□□□□ -1.61
VPS50-220ENST00000544910 SLC25A6P12236 298 aa5□□□□□ -1.61
VPS50-220ENST00000544910 CDX1P47902 265 aaPredicted RBP5□□□□□ -1.61
VPS50-220ENST00000544910 CNN1P51911 297 aaKnown RBP5□□□□□ -1.61
VPS50-220ENST00000544910 ATP6V1FQ16864 119 aa5□□□□□ -1.61
VPS50-220ENST00000544910 RIPPLY2Q5TAB7 128 aa5□□□□□ -1.61
VPS50-220ENST00000544910 SELENOHQ8IZQ5 122 aaKnown RBP5□□□□□ -1.61
VPS50-220ENST00000544910 GMPPAQ96IJ6 420 aaPredicted RBP5□□□□□ -1.61
VPS50-220ENST00000544910 SLC35E1Q96K37 410 aa5□□□□□ -1.61
VPS50-220ENST00000544910 TMEM222Q9H0R3 208 aa5□□□□□ -1.61
VPS50-220ENST00000544910 AUP1Q9Y679 476 aa5□□□□□ -1.61
VPS50-220ENST00000544910 A0A0G2JMM0 328 aa5□□□□□ -1.61
VPS50-220ENST00000544910 A0A1B0GU03 582 aa5□□□□□ -1.61
VPS50-220ENST00000544910 A0A1W2PPB8 328 aa5□□□□□ -1.61
VPS50-220ENST00000544910 A0A1W2PRS3 328 aa5□□□□□ -1.61
VPS50-220ENST00000544910 OOEPA6NGQ2 149 aa5□□□□□ -1.61
VPS50-220ENST00000544910 LRRC30A6NM36 301 aa5□□□□□ -1.61
VPS50-220ENST00000544910 KIR3DP1A8MWS1 328 aa5□□□□□ -1.61
VPS50-220ENST00000544910 H0Y980 276 aa5□□□□□ -1.61
VPS50-220ENST00000544910 CHST1O43916 411 aa5□□□□□ -1.61
VPS50-220ENST00000544910 MMP9P14780 707 aa5□□□□□ -1.61
VPS50-220ENST00000544910 VDAC1P21796 283 aa5□□□□□ -1.61
VPS50-220ENST00000544910 ACP1P24666 158 aa5□□□□□ -1.61
VPS50-220ENST00000544910 BTNL3Q6UXE8 466 aa5□□□□□ -1.61
VPS50-220ENST00000544910 PUSL1Q8N0Z8 303 aaKnown RBP5□□□□□ -1.61
VPS50-220ENST00000544910 DTD1Q8TEA8 209 aa5□□□□□ -1.61
VPS50-220ENST00000544910 MESP1Q9BRJ9 268 aa5□□□□□ -1.61
VPS50-220ENST00000544910 DCAF16Q9NXF7 216 aa5□□□□□ -1.61
VPS50-220ENST00000544910 FZR1Q9UM11 496 aa5□□□□□ -1.61
VPS50-220ENST00000544910 NOTCH4Q99466 2003 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 CXorf65A6NEN9 183 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 H3BQ15 152 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 COX5BP10606 129 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 PSG2P11465 335 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 UCP3P55916 312 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 BPIFB3P59826 476 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 CLEC12BQ2HXU8 276 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 FBXW9Q5XUX1 488 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 LEMD1Q68G75 181 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 ETV3LQ6ZN32 361 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 FA2HQ7L5A8 372 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 OR52M1Q8NGK5 317 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 EDARADDQ8WWZ3 215 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 NEIL1Q96FI4 390 aaPredicted RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 ELOVL1Q9BW60 279 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 IL36GQ9NZH8 169 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 PRSS50Q9UI38 385 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 PTPRSQ13332 1948 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 hCG_38984A0A1B0GV85 526 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 ST8SIA5O15466 376 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 CD82P27701 267 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 KIR2DS2P43631 304 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 DHRS7BQ6IAN0 325 aaPredicted RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 OR2D3Q8NGH3 330 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 DPF1Q92782 380 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 STARD4Q96DR4 205 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 BOD1Q96IK1 185 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 LINC00470Q9BZP3 86 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 KIAA1324LA8MWY0 1029 aaPredicted RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 SPINK2P20155 84 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 AMTP48728 403 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 RPL24P83731 157 aaKnown RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 GABRA6Q16445 453 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 ZNF385CQ66K41 422 aaPredicted RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 CISD2Q8N5K1 135 aaKnown RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 OR5D13Q8NGL4 314 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 OR1K1Q8NGR3 316 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 UBALD1Q8TB05 177 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 ACY3Q96HD9 319 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 ABHD14BQ96IU4 210 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 AKIRIN1Q9H9L7 192 aaPredicted RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 PNRC2Q9NPJ4 139 aaKnown RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 VAX2Q9UIW0 290 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 TUBD1Q9UJT1 453 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 AMDHD2Q9Y303 409 aa4.99□□□□□ -1.61
VPS50-220ENST00000544910 MRPS18CQ9Y3D5 142 aaKnown RBP4.99□□□□□ -1.61
VPS50-220ENST00000544910 KCNMB2Q9Y691 235 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms