RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 AP4M1O00189 453 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 GPR37O15354 613 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 TNFSF12O43508 249 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 SMPD2O60906 423 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 TMEM50AO95807 157 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 SP9P0CG40 484 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 LRRC75BQ2VPJ9 315 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 C20orf204Q6ZNR8 217 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.05□□□□□ -0.64
CPSF7-223ENST00000544669 LILRB2Q8N423 598 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF645Q8N7E2 425 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 TMEM105Q8N8V8 129 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 PRR7Q8TB68 274 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 C12orf49Q9H741 205 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 OBP2BQ9NPH6 170 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 IL36RNQ9UBH0 155 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 CACNG5Q9UF02 275 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 A0A1W2PPH5 198 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 IFNL4K9M1U5 179 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 TNFSF15O95150 251 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 CBR1P16152 277 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 EPHA1P21709 976 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 CEACAM6P40199 344 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 ASCL1P50553 236 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 NOVA1P51513 510 aaKnown RBP11.05□□□□□ -0.64
CPSF7-223ENST00000544669 ICAM4Q14773 271 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 TESK1Q15569 626 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 ADAM5Q6NVV9 412 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 HEPN1Q6WQI6 88 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 MRGPRGQ86SM5 289 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 ZFP82Q8N141 532 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 FAM24BQ8N5W8 94 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 WDR31Q8NA23 367 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 KCNS2Q9ULS6 477 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 WASF3Q9UPY6 502 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 LOC102723971A0A1B0GUV8 181 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 CDRT15L2A8MXV6 281 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 RPS23P62266 143 aaKnown RBP11.04□□□□□ -0.64
CPSF7-223ENST00000544669 LPAL2Q16609 132 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 TMEM41BQ5BJD5 291 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 Q6ZT83 130 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 RARRES2Q99969 163 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF251Q9BRH9 671 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 CTDSP1Q9GZU7 261 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 CXXC4Q9H2H0 198 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 SMOC1Q9H4F8 434 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 HES4Q9HCC6 221 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.04□□□□□ -0.64
CPSF7-223ENST00000544669 CRIM1Q9NZV1 1036 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 OR14J1Q9UGF5 321 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 LIPGQ9Y5X9 500 aa11.04□□□□□ -0.64
CPSF7-223ENST00000544669 MED12Q93074 2177 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 PCP4L1A6NKN8 68 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 A6NLC8 198 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 SIRPB1O00241 398 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 PPIHO43447 177 aaKnown RBP11.03□□□□□ -0.64
CPSF7-223ENST00000544669 RHBDL1O75783 438 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 IGHG3P01860 377 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 IL2RGP31785 369 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 HAGHQ16775 308 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF787Q6DD87 383 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF66Q6ZN08 573 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 FAM214BQ7L5A3 538 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 CENPVQ7Z7K6 275 aaPredicted RBP11.03□□□□□ -0.64
CPSF7-223ENST00000544669 ODF3L1Q8IXM7 274 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 C17orf78Q8N4C9 275 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 RAB39BQ96DA2 213 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 MUCL1Q96DR8 90 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF488Q96MN9 340 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 C20orf24Q9BUV8 137 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 BCL2L14Q9BZR8 327 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 DEFB127Q9H1M4 99 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 TMPRSS5Q9H3S3 457 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 SEBOXQ9HB31 216 aaPredicted RBP11.03□□□□□ -0.64
CPSF7-223ENST00000544669 VAX2Q9UIW0 290 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 PPP1R3CQ9UQK1 317 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 KMT2EQ8IZD2 1858 aa11.03□□□□□ -0.64
CPSF7-223ENST00000544669 SPTBN5Q9NRC6 3674 aaKnown RBP11.03□□□□□ -0.64
CPSF7-223ENST00000544669 COL27A1Q8IZC6 1860 aaPredicted RBP11.03□□□□□ -0.64
CPSF7-223ENST00000544669 EIF3GO75821 320 aaKnown RBP eCLIP11.02□□□□□ -0.64
CPSF7-223ENST00000544669 HAND1O96004 215 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 IGHV2-5P01817 119 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF806P0C7X5 589 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 BCL2P10415 239 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 EIF2S3P41091 472 aaKnown RBP11.02□□□□□ -0.64
CPSF7-223ENST00000544669 AKR1C3P42330 323 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 GLIPR1P48060 266 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 CCL20P78556 96 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 PAX5Q02548 391 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 FGFRL1Q8N441 504 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF525Q8N782 197 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 LURAP1Q96LR2 239 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 TAAR6Q96RI8 345 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 OR2J1Q9GZK6 312 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 RAB9BQ9NP90 201 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 OR1A1Q9P1Q5 309 aa11.02□□□□□ -0.64
CPSF7-223ENST00000544669 WDR1O75083 606 aa11.02□□□□□ -0.65
CPSF7-223ENST00000544669 RPP30P78346 268 aaKnown RBP11.02□□□□□ -0.65
CPSF7-223ENST00000544669 DLK1P80370 383 aa11.02□□□□□ -0.65
CPSF7-223ENST00000544669 FABP9Q0Z7S8 132 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms