RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 KCNIP1Q9NZI2 227 aa11.76□□□□□ -0.53
LSM14A-203ENST00000544216 CLCF1Q9UBD9 225 aa11.76□□□□□ -0.53
LSM14A-203ENST00000544216 DUSP13Q9UII6 198 aa11.76□□□□□ -0.53
LSM14A-203ENST00000544216 LAMA5O15230 3695 aa11.75□□□□□ -0.53
LSM14A-203ENST00000544216 HAND1O96004 215 aa11.75□□□□□ -0.53
LSM14A-203ENST00000544216 IL2RGP31785 369 aa11.75□□□□□ -0.53
LSM14A-203ENST00000544216 SNCAP37840 140 aa11.75□□□□□ -0.53
LSM14A-203ENST00000544216 KIR2DL2P43627 348 aaPredicted RBP11.75□□□□□ -0.53
LSM14A-203ENST00000544216 SRSF7Q16629 238 aaKnown RBP eCLIP11.75□□□□□ -0.53
LSM14A-203ENST00000544216 RFESDQ8TAC1 157 aa11.75□□□□□ -0.53
LSM14A-203ENST00000544216 PLPPR2Q96GM1 343 aa11.75□□□□□ -0.53
LSM14A-203ENST00000544216 OPN3Q9H1Y3 402 aaPredicted RBP11.75□□□□□ -0.53
LSM14A-203ENST00000544216 GABRA2P47869 451 aa11.75□□□□□ -0.53
LSM14A-203ENST00000544216 INO80CQ6PI98 192 aaPredicted RBP11.75□□□□□ -0.53
LSM14A-203ENST00000544216 SARAFQ96BY9 339 aa11.75□□□□□ -0.53
LSM14A-203ENST00000544216 PSPNO60542 156 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 FIP1L1Q6UN15 594 aaKnown RBP11.74□□□□□ -0.53
LSM14A-203ENST00000544216 Q6ZRM9 215 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 Q8IYB0 196 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 ZNF610Q8N9Z0 462 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 OR1L1Q8NH94 360 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 SPTA1P02549 2419 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.74□□□□□ -0.53
LSM14A-203ENST00000544216 PGA5P0DJD9 388 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 ID3Q02535 119 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 TESK1Q15569 626 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 STX12Q86Y82 276 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 C2CD4CQ8TF44 421 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 GTF3AQ92664 365 aaKnown RBP11.74□□□□□ -0.53
LSM14A-203ENST00000544216 ARV1Q9H2C2 271 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 TXNL1O43396 289 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 GCH1P30793 250 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 HAGHQ16775 308 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 ZNF497Q6ZNH5 498 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 THNSL2Q86YJ6 484 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 SFT2D1Q8WV19 159 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 RARRES2Q99969 163 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 KCNJ16Q9NPI9 418 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 APC2O95996 2303 aa11.74□□□□□ -0.53
LSM14A-203ENST00000544216 RPL23AP62750 156 aaKnown RBP11.73□□□□□ -0.53
LSM14A-203ENST00000544216 C10orf91Q5T1B1 145 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 MRGPRDQ8TDS7 321 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 ASCL3Q9NQ33 180 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 ZFHX4Q86UP3 3567 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 IGHV3-43A0A0B4J1X8 118 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 DEFB108AA8MXU0 73 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 METTL15P1P0C7V9 234 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 IGHV3-43DP0DP04 118 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 CCL20P78556 96 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 AKR1C8PQ5T2L2 129 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 VHLLQ6RSH7 139 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 OR52L2PQ8NGH6 319 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 C14orf79Q96F83 325 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 STRAPQ9Y3F4 350 aaKnown RBP11.73□□□□□ -0.53
LSM14A-203ENST00000544216 UMAD1C9J7I0 102 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 MLNRO43193 412 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 PITX3O75364 302 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 RBMXL2O75526 392 aaKnown RBP11.73□□□□□ -0.53
LSM14A-203ENST00000544216 CECR9P0C854 216 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 EDDM3AQ14507 147 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 DHRS7BQ6IAN0 325 aaPredicted RBP11.73□□□□□ -0.53
LSM14A-203ENST00000544216 PIP4P1Q86T03 277 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 PBDC1Q9BVG4 233 aa11.73□□□□□ -0.53
LSM14A-203ENST00000544216 PUS1Q9Y606 427 aaKnown RBP eCLIP11.73□□□□□ -0.53
LSM14A-203ENST00000544216 KRASP01116 189 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 H2AFB1P0C5Y9 115 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 CBR1P16152 277 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 CD82P27701 267 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 MDH2P40926 338 aaKnown RBP11.72□□□□□ -0.53
LSM14A-203ENST00000544216 RAB5CP51148 216 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 SHEQ5VZ18 495 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 NINJ1Q92982 152 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 ISOC2Q96AB3 205 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 KPTNQ9Y664 436 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 MUC6Q6W4X9 2439 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 IQCF6A8MYZ5 107 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
LSM14A-203ENST00000544216 IFNA5P01569 189 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 IGHG3P01860 377 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 ZNF816Q0VGE8 651 aaPredicted RBP11.72□□□□□ -0.53
LSM14A-203ENST00000544216 SPANXN5Q5MJ07 72 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 BTNL3Q6UXE8 466 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 DRAM1Q8N682 238 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 OR8G5Q8NG78 346 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 NDRG3Q9UGV2 375 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 TRBV6-6A0A0A6YYG2 114 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 CTRB1P17538 263 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 ERVK11-1P61568 191 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 CTRB2Q6GPI1 263 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 MOB1BQ7L9L4 216 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 WDR31Q8NA23 367 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 RXFP4Q8TDU9 374 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 GALMQ96C23 342 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 CLCC1Q96S66 551 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 CABLES2Q9BTV7 478 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 OR2D2Q9H210 308 aa11.72□□□□□ -0.53
LSM14A-203ENST00000544216 PCP4L1A6NKN8 68 aa11.71□□□□□ -0.53
LSM14A-203ENST00000544216 IGHV3-13P01766 116 aa11.71□□□□□ -0.53
LSM14A-203ENST00000544216 IGHV3-7P01780 117 aa11.71□□□□□ -0.53
LSM14A-203ENST00000544216 RPL35P42766 123 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms