RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 FCER2P06734 321 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 GSTT2P0CG29 244 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 GSTT2BP0CG30 244 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 CD34P28906 385 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 CBX5P45973 191 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 PRRX1P54821 245 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SRSF7Q16629 238 aaKnown RBP eCLIP11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 MIDNQ504T8 468 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ZNF626Q68DY1 528 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 GVQW1Q8N7I0 195 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OR4A4PQ8NGN8 299 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OR9G1Q8NH87 305 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ZNF596Q8TC21 504 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OCSTAMPQ9BR26 566 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OCEL1Q9H607 264 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 PSG11Q9UQ72 335 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 FAM96BQ9Y3D0 163 aa11.79□□□□□ -0.52
TNFRSF1A-216ENST00000543995 IGKV1D-8A0A087WSZ0 117 aa11.78□□□□□ -0.52
TNFRSF1A-216ENST00000543995 RGS11O94810 467 aa11.78□□□□□ -0.52
TNFRSF1A-216ENST00000543995 LPLP06858 475 aa11.78□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ZBTB25P24278 435 aa11.78□□□□□ -0.52
TNFRSF1A-216ENST00000543995 GNMTQ14749 295 aa11.78□□□□□ -0.52
TNFRSF1A-216ENST00000543995 RNASE12Q5GAN4 147 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-216ENST00000543995 STEAP3Q658P3 488 aa11.78□□□□□ -0.52
TNFRSF1A-216ENST00000543995 FAM53AQ6NSI3 398 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SOX21Q9Y651 276 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-216ENST00000543995 A0A0U1RQK1 487 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 A0A1W2PPE3 182 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 FABP12A6NFH5 140 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ODF3BA8MYP8 253 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 J3QR06 171 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 BET1O15155 118 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 TPPPO94811 219 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 HTR1DP28221 377 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 PPP1CCP36873 323 aaKnown RBP11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ARPC4P59998 168 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 HLA-DRB5Q30154 266 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 MORN2Q502X0 79 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 IGSF11Q5DX21 431 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 PYHIN1Q6K0P9 492 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 FAM131AQ6UXB0 335 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 Q6ZS49 121 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 C9orf139Q6ZV77 190 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 HOGA1Q86XE5 327 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 BEND2Q8NDZ0 799 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 BEST4Q8NFU0 473 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OR10J5Q8NHC4 309 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ABHD1Q96SE0 405 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SLC6A7Q99884 636 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 MMP28Q9H239 520 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SCPEP1Q9HB40 452 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OR1A1Q9P1Q5 309 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 RABL2AQ9UBK7 228 aaPredicted RBP11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 RABL2BQ9UNT1 228 aa11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 TBL2Q9Y4P3 447 aaKnown RBP11.77□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SULT1C2O00338 296 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 YPEL1O60688 119 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 FBP1P09467 338 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 CEACAM6P40199 344 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 DEFB112Q30KQ8 113 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 LHFPL4Q7Z7J7 247 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 OR4P4Q8NGL7 312 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 OR10X1Q8NGY0 326 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 GPX8Q8TED1 209 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 FCAMRQ8WWV6 532 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 YPEL2Q96QA6 119 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 GINS4Q9BRT9 223 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ZNRD1Q9P1U0 126 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ANXA10Q9UJ72 324 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 AMMECR1Q9Y4X0 333 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 FN1P02751 2386 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 IGKV1-6A0A0C4DH72 117 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 MDFIC2A0A1B0GVS7 189 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 IGLV1-47P01700 117 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 HERPUD1Q15011 391 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 Q3ZCU0 254 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 MINOS1Q5TGZ0 78 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 RBMS3Q6XE24 437 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 OR2AK2Q8NG84 335 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 OR6Q1Q8NGQ2 317 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 CREB3L1Q96BA8 519 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 CABLES2Q9BTV7 478 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 HILPDAQ9Y5L2 63 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 MINOS1-NBL1R4GNA1 71 aa11.76□□□□□ -0.53
TNFRSF1A-216ENST00000543995 LEUTXA8MZ59 168 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 BUB1B-PAK6H3BSN5 160 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 GABARAPH6UMI1 98 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 SLC31A2O15432 143 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 CTXN2P0C2S0 81 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 CEACAM3P40198 252 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 MRPS10P82664 201 aaKnown RBP11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 SSX2Q16385 188 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 SPANXN2Q5MJ10 180 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 SIGLECL1Q8N7X8 197 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 C8orf31Q8N9H6 132 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 OR52I2Q8NH67 350 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 C17orf50Q8WW18 174 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 MALSU1Q96EH3 234 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms