RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 KCNIP3Q9Y2W7 256 aa9.18□□□□□ -0.94
SCG3-202ENST00000542355 PPIAL4EA0A075B759 164 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 TRAV38-1A0A0B4J264 116 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 ODAMA1E959 279 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 DBX1A6NMT0 343 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 PPIAL4DF5H284 164 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 G3V3Q6 166 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 TMPRSS2O15393 492 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 PPIAL4FP0DN26 164 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 SSTR5P35346 364 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 PAX5Q02548 391 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 TOR2AQ5JU69 321 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 C6orf183Q5T699 404 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 ZNF788Q6ZQV5 615 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 LDLRAD3Q86YD5 345 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 OR8H3Q8N146 312 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 FAM216BQ8N7L0 139 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 OR5D13Q8NGL4 314 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 RFESDQ8TAC1 157 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 ARL11Q969Q4 196 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 LURAP1Q96LR2 239 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 GAFA1Q96PS6 74 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 DNTTIP1Q9H147 329 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 NAA60Q9H7X0 242 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 PLSCR3Q9NRY6 295 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 PPIAL4AQ9Y536 164 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 IGHV1-69-2A0A0G2JMI3 117 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 C13orf42A0A1B0GVH6 325 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 C5orf51A6NDU8 294 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 NPIPB11E5RHQ5 1161 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 LGALS8O00214 317 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 ADAP1O75689 374 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 OR5AC1P0C628 307 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 HLA-GP17693 338 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 RELBQ01201 579 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 FAM53AQ6NSI3 398 aaPredicted RBP9.17□□□□□ -0.94
SCG3-202ENST00000542355 OR52L2PQ8NGH6 319 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 OR10V1Q8NGI7 309 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 GRPEL2Q8TAA5 225 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 RCC1LQ96I51 464 aaKnown RBP9.17□□□□□ -0.94
SCG3-202ENST00000542355 GPHA2Q96T91 129 aa9.17□□□□□ -0.94
SCG3-202ENST00000542355 TRAF4Q9BUZ4 470 aaPredicted RBP9.17□□□□□ -0.94
SCG3-202ENST00000542355 RBM7Q9Y580 266 aaKnown RBP9.17□□□□□ -0.94
SCG3-202ENST00000542355 CACNA1DQ01668 2161 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 A0A0B4J2A0 478 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 GPR31O00270 319 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 MPPED1O15442 326 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 GZMHP20718 246 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 P2RX3P56373 397 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 CCDC71LQ8N9Z2 235 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 PARP12Q9H0J9 701 aaKnown RBP9.16□□□□□ -0.94
SCG3-202ENST00000542355 METTL8Q9H825 291 aaKnown RBP9.16□□□□□ -0.94
SCG3-202ENST00000542355 TMEM160Q9NX00 188 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 SHPKQ9UHJ6 478 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 IGSF10Q6WRI0 2623 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 USP24Q9UPU5 2620 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 MPTX1A8MV57 137 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 LYNX1G3V0Z9 82 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 C15orf65H3BRN8 121 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 SIGLEC5O15389 551 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 PHF1O43189 567 aaPredicted RBP9.16□□□□□ -0.94
SCG3-202ENST00000542355 TNFSF12O43508 249 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 HOXB5P09067 269 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 OR8U9P0C7N5 309 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 LYNX1P0DP58 116 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 LUMP51884 338 aaPredicted RBP9.16□□□□□ -0.94
SCG3-202ENST00000542355 LTC4SQ16873 150 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 HFEQ30201 348 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 TBC1D26Q86UD7 250 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 CMTM1Q8IZ96 169 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 ZNF843Q8N446 348 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 OR8U1Q8NH10 309 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 GALNT14Q96FL9 552 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 RAB18Q9NP72 206 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 OR2S2Q9NQN1 319 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 CBLN4Q9NTU7 201 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 HSPB11Q9Y547 144 aa9.16□□□□□ -0.94
SCG3-202ENST00000542355 HIVEP3Q5T1R4 2406 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 IGHV3-43A0A0B4J1X8 118 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 C3orf85A0A1B0GTC6 90 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 A0A1W2PPR1 153 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 SPINT2O43291 252 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 CD8AP01732 235 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 SOD3P08294 240 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 IGHV3-43DP0DP04 118 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 COL8A2P25067 703 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 PPOXP50336 477 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 TMEM187Q14656 261 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 GNMTQ14749 295 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 LRRC37A5PQ49AS3 106 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 LAMTOR1Q6IAA8 161 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 TRAT1Q6PIZ9 186 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 GSG1LQ6UXU4 331 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 FAM185AQ8N0U4 392 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 FGFRL1Q8N441 504 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 TP53RKQ96S44 253 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 FAM234AQ9H0X4 552 aa9.15□□□□□ -0.94
SCG3-202ENST00000542355 NKX6-3A6NJ46 265 aa9.14□□□□□ -0.95
SCG3-202ENST00000542355 PGLYRP1O75594 196 aaPredicted RBP9.14□□□□□ -0.95
SCG3-202ENST00000542355 NDUFB7P17568 137 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms