RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 MMP9P14780 707 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 ZNF17P17021 662 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 KLK2P20151 261 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 NTSP30990 170 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 SFTPDP35247 375 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 TNFSF9P41273 254 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 ID4P47928 161 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 ZNF83P51522 516 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 PAX9P55771 341 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 TMPRSS3P57727 454 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 MFGE8Q08431 387 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-218ENST00000541615 FUT5Q11128 374 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 OR1Q1Q15612 314 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 HLA-DRB5Q30154 266 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 Q499Y3 187 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 MPV17L2Q567V2 206 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 BCDIN3DQ7Z5W3 292 aaKnown RBP4.47□□□□□ -1.69
SNHG1-218ENST00000541615 UMODL1-AS1Q8N2C9 162 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 TMEM256Q8N2U0 113 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 LRRC25Q8N386 305 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-218ENST00000541615 ZNF433Q8N7K0 673 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-218ENST00000541615 CDRT4Q8N9R6 151 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 OR2M3Q8NG83 312 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 OR4A16Q8NH70 328 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 OR1L3Q8NH93 324 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 APOBEC4Q8WW27 367 aaKnown RBP4.47□□□□□ -1.69
SNHG1-218ENST00000541615 NAT6Q93015 286 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 ZG16BQ96DA0 208 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 WDR34Q96EX3 536 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 DERL3Q96Q80 235 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 CDX2Q99626 313 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-218ENST00000541615 OR2D2Q9H210 308 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 IFI27L2Q9H2X8 130 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 GREM2Q9H772 168 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 WDR76Q9H967 626 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 TPSG1Q9NRR2 321 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 FBLN5Q9UBX5 448 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 DUSP13Q9UII6 198 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 PIGLQ9Y2B2 252 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 EMC9Q9Y3B6 208 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 OARD1Q9Y530 152 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 SIRT4Q9Y6E7 314 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-218ENST00000541615 ROBO1Q9Y6N7 1651 aa4.47□□□□□ -1.69
SNHG1-218ENST00000541615 FNDC1Q4ZHG4 1894 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-218ENST00000541615 COL11A2P13942 1736 aaPredicted RBP4.46□□□□□ -1.69
SNHG1-218ENST00000541615 FRMPD3Q5JV73 1810 aa4.46□□□□□ -1.69
SNHG1-218ENST00000541615 ARID2Q68CP9 1835 aa4.46□□□□□ -1.69
SNHG1-218ENST00000541615 COL2A1P02458 1487 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-218ENST00000541615 TRAV36DV7A0A075B6V5 113 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 RIIAD1A6NNX1 92 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 HHLA1C9JL84 531 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 H3BML4 177 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 J3KTA2 159 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 ISLRO14498 428 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 FFAR1O14842 300 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 DNPH1O43598 174 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 PITX3O75364 302 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 ZNF324O75467 553 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-218ENST00000541615 SERF1AO75920 110 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 MPZL1O95297 269 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 MPIG6BO95866 241 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 FAM106CPP0CH98 169 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 ZNF708P17019 499 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 FBLP22087 321 aaKnown RBP4.46□□□□□ -1.7
SNHG1-218ENST00000541615 AQP1P29972 269 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 TIA1P31483 386 aaKnown RBP eCLIP4.46□□□□□ -1.74e-6■■■■□ 22.9
SNHG1-218ENST00000541615 GPR183P32249 361 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 PPP1CCP36873 323 aaKnown RBP4.46□□□□□ -1.7
SNHG1-218ENST00000541615 RBMXP38159 391 aaKnown RBP4.46□□□□□ -1.7
SNHG1-218ENST00000541615 RPL34P49207 117 aaKnown RBP4.46□□□□□ -1.7
SNHG1-218ENST00000541615 ARL4DP49703 201 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 GFRA1P56159 465 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 DLX6P56179 175 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 SEC61GP60059 68 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 ERVK11-1P61568 191 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 RPL8P62917 257 aaKnown RBP4.46□□□□□ -1.7
SNHG1-218ENST00000541615 ZNF85Q03923 595 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 ACSM2AQ08AH3 577 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 PSG7Q13046 419 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 NFATC4Q14934 902 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 NR0B2Q15466 257 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 CD226Q15762 336 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 ZNF260Q3ZCT1 412 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 FAM106AQ4KMX7 169 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 ZNF385BQ569K4 471 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 ZNF766Q5HY98 468 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 TTC32Q5I0X7 151 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 FAM27D1Q5T7N8 215 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 MBNL2Q5VZF2 373 aaKnown RBP4.46□□□□□ -1.7
SNHG1-218ENST00000541615 HLA-DQA1Q5Y7H0 255 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 TMEM215Q68D42 235 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 TRNP1Q6NT89 227 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 FBXL22Q6P050 247 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 GLIPR1L1Q6UWM5 242 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 GLB1LQ6UWU2 654 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 PLXDC2Q6UX71 529 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.46□□□□□ -1.7
SNHG1-218ENST00000541615 DOK3Q7L591 496 aa4.46□□□□□ -1.7
SNHG1-218ENST00000541615 HOGA1Q86XE5 327 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms