RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 LOXL3P58215 753 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 ARPC4P59998 168 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 ACTBP60709 375 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 ACTG1P63261 375 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 SSBP1Q04837 148 aaKnown RBP7.65□□□□□ -1.18
DDX55-208ENST00000541259 GNMTQ14749 295 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 KIR2DS1Q14954 304 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 CHRFAM7AQ494W8 412 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 TRIQKQ629K1 86 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 ZNF57Q68EA5 555 aaPredicted RBP7.65□□□□□ -1.18
DDX55-208ENST00000541259 TRAT1Q6PIZ9 186 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 ZNF782Q6ZMW2 699 aaPredicted RBP7.65□□□□□ -1.18
DDX55-208ENST00000541259 TOMM5Q8N4H5 51 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 OR5AP2Q8NGF4 316 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 OR10V1Q8NGI7 309 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 OR4A4PQ8NGN8 299 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 LEAP2Q969E1 77 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 TMPRSS13Q9BYE2 586 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 MRPL18Q9H0U6 180 aaKnown RBP7.65□□□□□ -1.18
DDX55-208ENST00000541259 SIRPDQ9H106 197 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 GAL3ST2Q9H3Q3 398 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 LINC00574Q9H8X3 128 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 HIF1ANQ9NWT6 349 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 OR1A1Q9P1Q5 309 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 MGAT4AQ9UM21 535 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 INSIG2Q9Y5U4 225 aa7.65□□□□□ -1.18
DDX55-208ENST00000541259 TRBV6-7A0A0A0MS04 114 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 ZNF736B4DX44 427 aaPredicted RBP7.64□□□□□ -1.19
DDX55-208ENST00000541259 PLA2G10O15496 165 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 UPK1BO75841 260 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 CD74P04233 296 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 CSF1P09603 554 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 ZNF735P0CB33 412 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 IGHV1-8P0DP01 117 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 MMP9P14780 707 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 FPR2P25090 351 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 PPP1CCP36873 323 aaKnown RBP7.64□□□□□ -1.19
DDX55-208ENST00000541259 GZMKP49863 264 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 TAS2R19P59542 299 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 PAX8Q06710 450 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 CDK10Q15131 360 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 STEAP3Q658P3 488 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 CYB5R2Q6BCY4 276 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 STEAP1BQ6NZ63 245 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 HEPN1Q6WQI6 88 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 OVCH2Q7RTZ1 564 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 VMO1Q7Z5L0 202 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 ZNF554Q86TJ5 538 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 OR4C16Q8NGL9 310 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 OR5H2Q8NGV7 314 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 OR56B4Q8NH76 319 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 BORCS5Q969J3 196 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 TMEM186Q96B77 213 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 GALMQ96C23 342 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 COX4I2Q96KJ9 171 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 TBX15Q96SF7 602 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 SLC6A7Q99884 636 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 CABLES2Q9BTV7 478 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 SUCNR1Q9BXA5 334 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 PARP12Q9H0J9 701 aaKnown RBP7.64□□□□□ -1.19
DDX55-208ENST00000541259 HRASLSQ9HDD0 168 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 OR2S2Q9NQN1 319 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 SIRT7Q9NRC8 400 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 EHFQ9NZC4 300 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 SLC23A1Q9UHI7 598 aa7.64□□□□□ -1.19
DDX55-208ENST00000541259 ZFHX3Q15911 3703 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 TRAV20A0A0B4J274 112 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 A0A1W2PPE3 182 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 A0A1W2PPH5 198 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 M0R1W7 72 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 SLC31A2O15432 143 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 TOX4O94842 621 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 RAB3DO95716 219 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 AKAIN1P0CW23 69 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 OR5H8P0DN80 308 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 NFYAP23511 347 aaPredicted RBP7.63□□□□□ -1.19
DDX55-208ENST00000541259 CEACAM6P40199 344 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 OR3A3P47888 321 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 INPP1P49441 399 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 ZNF134P52741 427 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 TAS2R46P59540 309 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 HTD2P86397 168 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 KRTAP1-1Q07627 177 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 KLRD1Q13241 179 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 DYRK1AQ13627 763 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 DCAF12L2Q5VW00 463 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 HCP5Q6MZN7 132 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 FAHD2BQ6P2I3 314 aaPredicted RBP7.63□□□□□ -1.19
DDX55-208ENST00000541259 C16orf87Q6PH81 154 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 BTNL3Q6UXE8 466 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 GLCCI1Q86VQ1 547 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 LDLRAD3Q86YD5 345 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 PDZD9Q8IXQ8 264 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 KIR3DL3Q8N743 410 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 OR10J5Q8NHC4 309 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 FAHD2AQ96GK7 314 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 PCGF1Q9BSM1 259 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 NECAP2Q9NVZ3 263 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 GFOD1Q9NXC2 390 aa7.63□□□□□ -1.19
DDX55-208ENST00000541259 TAS2R8Q9NYW2 309 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms