RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 OR4P4Q8NGL7 312 aa15.24■□□□□ 0.03
VPS33A-205ENST00000541169 OR4A4PQ8NGN8 299 aa15.24■□□□□ 0.03
VPS33A-205ENST00000541169 FAM216AQ8WUB2 273 aa15.24■□□□□ 0.03
VPS33A-205ENST00000541169 C15orf40Q8WUR7 153 aa15.24■□□□□ 0.03
VPS33A-205ENST00000541169 TMEM158Q8WZ71 300 aa15.24■□□□□ 0.03
VPS33A-205ENST00000541169 ZNF48Q96MX3 618 aaPredicted RBP15.24■□□□□ 0.03
VPS33A-205ENST00000541169 YPEL2Q96QA6 119 aa15.24■□□□□ 0.03
VPS33A-205ENST00000541169 OCSTAMPQ9BR26 566 aa15.24■□□□□ 0.03
VPS33A-205ENST00000541169 ZNF286AQ9HBT8 521 aa15.24■□□□□ 0.03
VPS33A-205ENST00000541169 COMMD3Q9UBI1 195 aa15.24■□□□□ 0.03
VPS33A-205ENST00000541169 PSG11Q9UQ72 335 aa15.24■□□□□ 0.03
VPS33A-205ENST00000541169 CEPT1Q9Y6K0 416 aa15.24■□□□□ 0.03
VPS33A-205ENST00000541169 TRAV18A0A075B6X5 111 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 A0A1W2PRD5 423 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 A0A1W2PRF3 423 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 A0A1W2PRM7 423 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 CCDC160A6NGH7 325 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 FCGR3AP08637 254 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 GDNFP39905 211 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 CBX5P45973 191 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 HLA-DRB3P79483 266 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 PRB3Q04118 309 aaPredicted RBP15.23■□□□□ 0.03
VPS33A-205ENST00000541169 SPCS2Q15005 226 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 TMEM69Q5SWH9 247 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 OR10X1Q8NGY0 326 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 OR1L1Q8NH94 360 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 ADAM30Q9UKF2 790 aa15.23■□□□□ 0.03
VPS33A-205ENST00000541169 JMJD1CQ15652 2540 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 DNAJC9-AS1A6NH13 148 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 ITGB1BP1O14713 200 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 RNASE1P07998 156 aaKnown RBP15.22■□□□□ 0.03
VPS33A-205ENST00000541169 CTXN2P0C2S0 81 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 BRS3P32247 399 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 LTC4SQ16873 150 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 LRRC75BQ2VPJ9 315 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 MORN2Q502X0 79 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 LIAT1Q6ZQX7 453 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 DYNC2LI1Q8TCX1 351 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 EDARADDQ8WWZ3 215 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 RABL2AQ9UBK7 228 aaPredicted RBP15.22■□□□□ 0.03
VPS33A-205ENST00000541169 RSL24D1Q9UHA3 163 aaKnown RBP15.22■□□□□ 0.03
VPS33A-205ENST00000541169 RABL2BQ9UNT1 228 aa15.22■□□□□ 0.03
VPS33A-205ENST00000541169 SVEP1Q4LDE5 3571 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 HOXA3O43365 443 aaPredicted RBP15.21■□□□□ 0.03
VPS33A-205ENST00000541169 TXNL1O43396 289 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 RAB7AP51149 207 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 UBA52P62987 128 aaKnown RBP15.21■□□□□ 0.03
VPS33A-205ENST00000541169 SLC9A3R2Q15599 337 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 SSX2Q16385 188 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 OLFML2AQ68BL7 652 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 SLC25A48Q6ZT89 311 aaKnown RBP15.21■□□□□ 0.03
VPS33A-205ENST00000541169 ZDHHC22Q8N966 263 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 DTX3Q8N9I9 347 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 IL1F10Q8WWZ1 152 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 RPEQ96AT9 228 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 AJUBAQ96IF1 538 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 HDHD3Q9BSH5 251 aaPredicted RBP15.21■□□□□ 0.03
VPS33A-205ENST00000541169 AUNIPQ9H7T9 357 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 RAB18Q9NP72 206 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 ABCB10Q9NRK6 738 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 PITPNC1Q9UKF7 332 aa15.21■□□□□ 0.03
VPS33A-205ENST00000541169 TMEM235A6NFC5 223 aa15.2■□□□□ 0.02
VPS33A-205ENST00000541169 LY6LH3BQJ8 138 aa15.2■□□□□ 0.02
VPS33A-205ENST00000541169 FABP7O15540 132 aa15.2■□□□□ 0.02
VPS33A-205ENST00000541169 HSPA12AO43301 675 aa15.2■□□□□ 0.02
VPS33A-205ENST00000541169 VENTXO95231 258 aa15.2■□□□□ 0.02
VPS33A-205ENST00000541169 LHFPL4Q7Z7J7 247 aa15.2■□□□□ 0.02
VPS33A-205ENST00000541169 OR2AK2Q8NG84 335 aa15.2■□□□□ 0.02
VPS33A-205ENST00000541169 SSX3Q99909 188 aa15.2■□□□□ 0.02
VPS33A-205ENST00000541169 MDFIC2A0A1B0GVS7 189 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 FAM172BPA6NC97 362 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 ZNF137PP52743 207 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 TPTE2P1Q5T6R2 138 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 C16orf87Q6PH81 154 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 BAIAP2L2Q6UXY1 529 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 OR8H3Q8N146 312 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 ZNF439Q8NDP4 499 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 OR10J5Q8NHC4 309 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 TOMM40LQ969M1 308 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 DGCR14Q96DF8 476 aaKnown RBP15.19■□□□□ 0.02
VPS33A-205ENST00000541169 TOLLIPQ9H0E2 274 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 RBM38Q9H0Z9 239 aaKnown RBP15.19■□□□□ 0.02
VPS33A-205ENST00000541169 VPREB3Q9UKI3 123 aa15.19■□□□□ 0.02
VPS33A-205ENST00000541169 SOX21Q9Y651 276 aaPredicted RBP15.19■□□□□ 0.02
VPS33A-205ENST00000541169 FAM25AB3EWG3 89 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 FAM25CB3EWG5 89 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 FAM25GB3EWG6 89 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 GAPDHP04406 335 aaKnown RBP15.18■□□□□ 0.02
VPS33A-205ENST00000541169 GNG10P50151 68 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 Q6ZPA2 131 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 CABLES2Q9BTV7 478 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 ABHD14AQ9BUJ0 271 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 SCPEP1Q9HB40 452 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 ESM1Q9NQ30 184 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 SLC23A1Q9UHI7 598 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 HILPDAQ9Y5L2 63 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 A3GALT2U3KPV4 340 aa15.18■□□□□ 0.02
VPS33A-205ENST00000541169 IGHV3-43A0A0B4J1X8 118 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 RGS5O15539 181 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 HPGDSO60760 199 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms