RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 CD3DP04234 171 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 CSF1P09603 554 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 GSTT2P0CG29 244 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 GSTT2BP0CG30 244 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 IGHV1-8P0DP01 117 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 ZNF137PP52743 207 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 TAS2R19P59542 299 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 GNMTQ14749 295 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 IGSF11Q5DX21 431 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 C1orf229Q6ZS94 237 aaPredicted RBP8.62□□□□□ -1.03
VPS33A-204ENST00000540669 FAM185AQ8N0U4 392 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 ARRDC1Q8N5I2 433 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 LINC00311Q8N616 119 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 TEX29Q8N6K0 151 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 ZNF565Q8N9K5 539 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 OR4D10Q8NGI6 311 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 OR4C16Q8NGL9 310 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 CCDC107Q8WV48 283 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 TMEM186Q96B77 213 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 UPRTQ96BW1 309 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 AGMATQ9BSE5 352 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 PARP12Q9H0J9 701 aaKnown RBP8.62□□□□□ -1.03
VPS33A-204ENST00000540669 METTL8Q9H825 291 aaKnown RBP8.62□□□□□ -1.03
VPS33A-204ENST00000540669 CHMP1AQ9HD42 196 aaPredicted RBP8.62□□□□□ -1.03
VPS33A-204ENST00000540669 RAB9BQ9NP90 201 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 IDI2-AS1Q9NZ38 188 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 OR1A1Q9P1Q5 309 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 KCNS2Q9ULS6 477 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 MEX3AA1L020 520 aaKnown RBP8.61□□□□□ -1.03
VPS33A-204ENST00000540669 ZNF736B4DX44 427 aaPredicted RBP8.61□□□□□ -1.03
VPS33A-204ENST00000540669 SPINT2O43291 252 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 CD5LO43866 347 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 YPEL1O60688 119 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 CTXN2P0C2S0 81 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 ZNF16P17020 682 aaPredicted RBP8.61□□□□□ -1.03
VPS33A-204ENST00000540669 HOXB4P17483 251 aaPredicted RBP8.61□□□□□ -1.03
VPS33A-204ENST00000540669 HRH1P35367 487 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 MRPS15P82914 257 aaKnown RBP8.61□□□□□ -1.03
VPS33A-204ENST00000540669 SCGB2A2Q13296 93 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 ASAH1Q13510 395 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 CDK10Q15131 360 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 RNASE12Q5GAN4 147 aaKnown RBP8.61□□□□□ -1.03
VPS33A-204ENST00000540669 PRAMEF5Q5TYX0 476 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 AADACL3Q5VUY0 350 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 FAM53AQ6NSI3 398 aaPredicted RBP8.61□□□□□ -1.03
VPS33A-204ENST00000540669 STEAP1BQ6NZ63 245 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 DHRS11Q6UWP2 260 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 MAPK1IP1LQ8NDC0 245 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 OR11H6Q8NGC7 330 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 BORCS5Q969J3 196 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 ARL11Q969Q4 196 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 YPEL2Q96QA6 119 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 C7orf50Q9BRJ6 194 aaKnown RBP8.61□□□□□ -1.03
VPS33A-204ENST00000540669 TINAGL1Q9GZM7 467 aaPredicted RBP8.61□□□□□ -1.03
VPS33A-204ENST00000540669 FXYD6Q9H0Q3 95 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 IFI27L2Q9H2X8 130 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 IFT46Q9NQC8 304 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 YAE1D1Q9NRH1 226 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 SESN1Q9Y6P5 492 aa8.61□□□□□ -1.03
VPS33A-204ENST00000540669 A0A1W2PPH5 198 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 RNASEK-C17orf49H0YIS7 233 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 LY6G6DO95868 133 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 AVPP01185 164 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 AKAIN1P0CW23 69 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 OMGP23515 440 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 ERVFRD-1P60508 538 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 MSMO1Q15800 293 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 ZNF626Q68DY1 528 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 SLC25A48Q6ZT89 311 aaKnown RBP8.6□□□□□ -1.03
VPS33A-204ENST00000540669 GLCCI1Q86VQ1 547 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 BEND2Q8NDZ0 799 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 OR13C8Q8NGS7 320 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 UBALD1Q8TB05 177 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 SETD6Q8TBK2 473 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 GIMAP1Q8WWP7 306 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 GALMQ96C23 342 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 C5orf30Q96GV9 206 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 AJUBAQ96IF1 538 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 ST6GALNAC5Q9BVH7 336 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 TMEM133Q9H2Q1 129 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 HRASLSQ9HDD0 168 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 NECAP2Q9NVZ3 263 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 HIF1ANQ9NWT6 349 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 ING3Q9NXR8 418 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 KCNIP1Q9NZI2 227 aa8.6□□□□□ -1.03
VPS33A-204ENST00000540669 IGHV2-26A0A0B4J1V2 119 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 A8MV72 311 aaPredicted RBP8.59□□□□□ -1.03
VPS33A-204ENST00000540669 M0QYG6 137 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 IGLV2-14P01704 120 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 OR5H8P0DN80 308 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 HLA-DMAP28067 261 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 ZNF134P52741 427 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 AP3S2P59780 193 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 EIF4EBP1Q13541 118 aaPredicted RBP8.59□□□□□ -1.03
VPS33A-204ENST00000540669 MEF2DQ14814 521 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 MORN2Q502X0 79 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 RNASE10Q5GAN6 216 aaKnown RBP8.59□□□□□ -1.03
VPS33A-204ENST00000540669 KLF17Q5JT82 389 aaPredicted RBP8.59□□□□□ -1.03
VPS33A-204ENST00000540669 LDLRAD2Q5SZI1 272 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 TRIQKQ629K1 86 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms