RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 LGALS7P47929 136 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 MRPS34P82930 218 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 FAM78BQ5VT40 261 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 PLXDC1Q8IUK5 500 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 TMEM217Q8N7C4 229 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 OR52L2PQ8NGH6 319 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 TM4SF19Q96DZ7 209 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 SAMD10Q9BYL1 202 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 STARD5Q9NSY2 213 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 C19orf53Q9UNZ5 99 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 IGHV2-26A0A0B4J1V2 119 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 A0A1W2PP11 408 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 SRSF10O75494 262 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 ZNF883P0CG24 379 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 ZNF93P35789 620 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 ECI1P42126 302 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 RBPJQ06330 500 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 ZNF74Q16587 644 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 TSPO2Q5TGU0 170 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 KCTD18Q6PI47 426 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 GLIPR1L1Q6UWM5 242 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 OR4S2Q8NH73 311 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 LIPHQ8WWY8 451 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 C8orf44Q96CB5 159 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 SPACA5Q96QH8 159 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 ATP5SQ99766 215 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 REPIN1Q9BWE0 567 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 RBM24Q9BX46 236 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 NAA60Q9H7X0 242 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 RPRMQ9NS64 109 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 RYDENQ9NUL5 291 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 CDC42EP3Q9UKI2 254 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 VDAC3Q9Y277 283 aa8.15□□□□□ -1.1
CTNNA1-243ENST00000540387 IGKV1D-42A0A075B6H8 117 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 GAGE12BA1L429 117 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 FAM166BA8MTA8 275 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 C9orf172C9J069 976 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 CSTAP01040 98 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 ISG15P05161 165 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 FAM53BQ14153 422 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 ZNF726P1Q15940 193 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 FHL5Q5TD97 284 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 WDR74Q6RFH5 385 aaPredicted RBP8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 TCF23Q7RTU1 214 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 MRGPRGQ86SM5 289 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 CDRT4Q8N9R6 151 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 PLPPR1Q8TBJ4 325 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 NAT6Q93015 286 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 RERGQ96A58 199 aaPredicted RBP8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 DDIT4LQ96D03 193 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 G6PC2Q9NQR9 355 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 R4GMQ9 66 aa8.15□□□□□ -1.11
CTNNA1-243ENST00000540387 IGKV1D-8A0A087WSZ0 117 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 DUXBA0A1W2PPF3 345 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 ZNF878C9JN71 531 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 TNFSF12O43508 249 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 CD59P13987 128 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 TLE3Q04726 772 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 CD226Q15762 336 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 LIAT1Q6ZQX7 453 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 ODF3L1Q8IXM7 274 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 C20orf196Q8IYI0 205 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 KLHDC1Q8N7A1 406 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 LRTM2Q8N967 370 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 KCNG3Q8TAE7 436 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 DAZLQ92904 295 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 ADAT3Q96EY9 351 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 UHRF2Q96PU4 802 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 FAM103A1Q9BTL3 118 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 TMEM59Q9BXS4 323 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 KLHL13Q9P2N7 655 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 RALGAPA1Q6GYQ0 2036 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 SERPINE3A8MV23 424 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 GABRA2P47869 451 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 SLC6A8P48029 635 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 CLDN17P56750 224 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 MLF1P58340 268 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 TLE1Q04724 770 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 RPL18Q07020 188 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 KRTCAP3Q53RY4 240 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 EMC4Q5J8M3 183 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 SAMD13Q5VXD3 122 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 TMEM144Q7Z5S9 345 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 ARHGEF39Q8N4T4 335 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 RTN4IP1Q8WWV3 396 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 MBD3L1Q8WWY6 194 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 C1orf147Q96MC9 270 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 ZNF586Q9NXT0 402 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 B3GALT1Q9Y5Z6 326 aa8.14□□□□□ -1.11
CTNNA1-243ENST00000540387 PTPRZ1P23471 2315 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-243ENST00000540387 SSSCA1O60232 199 aa8.13□□□□□ -1.11
CTNNA1-243ENST00000540387 TOX4O94842 621 aa8.13□□□□□ -1.11
CTNNA1-243ENST00000540387 HLA-HP01893 362 aa8.13□□□□□ -1.11
CTNNA1-243ENST00000540387 GYPAP02724 150 aa8.13□□□□□ -1.11
CTNNA1-243ENST00000540387 LHX2P50458 406 aa8.13□□□□□ -1.11
CTNNA1-243ENST00000540387 DEFB134Q4QY38 66 aa8.13□□□□□ -1.11
CTNNA1-243ENST00000540387 LRRC10Q5BKY1 277 aa8.13□□□□□ -1.11
CTNNA1-243ENST00000540387 ZNF468Q5VIY5 522 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms