RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 CCDC54Q8NEL0 328 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 DMBX1Q8NFW5 382 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 OR8B3Q8NGG8 313 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 OR4D10Q8NGI6 311 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 OR8S1Q8NH09 359 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 GLYATL2Q8WU03 294 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 PPP1R1CQ8WVI7 109 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 ZNRF4Q8WWF5 429 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 AQP3Q92482 292 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 OR8B2Q96RD0 313 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 TTTY10Q9BZA0 68 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 CHST6Q9GZX3 395 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 SMDT1Q9H4I9 107 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 MSL2Q9HCI7 577 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 SMCO4Q9NRQ5 59 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 UQCC1Q9NVA1 299 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 KCNG2Q9UJ96 466 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 TIMM10BQ9Y5J6 103 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 R4GMQ9 66 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 LOC100509620A0A075B734 347 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 PRSS37A4D1T9 235 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 C5orf51A6NDU8 294 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 LRRC30A6NM36 301 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 DBX1A6NMT0 343 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 C1orf196B1AJZ1 125 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 MFNGO00587 321 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 NUPL2O15504 423 aaKnown RBP4.93□□□□□ -1.62
CPSF7-219ENST00000539952 ENSAO43768 121 aaKnown RBP4.93□□□□□ -1.62
CPSF7-219ENST00000539952 JTBO76095 146 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 HLA-DQA2P01906 255 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 PGA4P0DJD7 388 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 PGA3P0DJD8 388 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 NR2C1P13056 603 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 ZNF32P17041 273 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 BDKRB2P30411 391 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 PMELP40967 661 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 WNT5AP41221 380 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 KIR3DL2P43630 455 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 MEOX2P50222 304 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 NPY4RP50391 375 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 CAV2P51636 162 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 ZNF133P52736 654 aaPredicted RBP4.93□□□□□ -1.62
CPSF7-219ENST00000539952 FGF12P61328 243 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 PCBD1P61457 104 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 PRKDCP78527 4128 aaKnown RBP4.93□□□□□ -1.62
CPSF7-219ENST00000539952 MRPS34P82930 218 aaKnown RBP4.93□□□□□ -1.62
CPSF7-219ENST00000539952 PSG4Q00888 419 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 PDZK1IP1Q13113 114 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 PEA15Q15121 130 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 SURF2Q15527 256 aaPredicted RBP4.93□□□□□ -1.62
CPSF7-219ENST00000539952 MEP1BQ16820 701 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 SCGB2B2Q4G0G5 96 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 SPRNQ5BIV9 151 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 MESTQ5EB52 335 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 GLYATL3Q5SZD4 288 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 SPATA46Q5T0L3 261 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 FAM27BQ5VT28 67 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 ATRAIDQ6UW56 229 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 Q6ZS46 218 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 Q6ZSV7 163 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 ZNF101Q8IZC7 436 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 C1orf87Q8N0U7 546 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 OR2Z1Q8NG97 314 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 OR5D14Q8NGL3 314 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 OR1S2Q8NGQ3 325 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 OR13C3Q8NGS6 347 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 TERB2Q8NHR7 220 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 NPRL2Q8WTW4 380 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 ANAPC16Q96DE5 110 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 MOGAT1Q96PD6 335 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 AQP10Q96PS8 301 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 C12orf57Q99622 126 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 MRPL13Q9BYD1 178 aaKnown RBP4.93□□□□□ -1.62
CPSF7-219ENST00000539952 TINAGL1Q9GZM7 467 aaPredicted RBP4.93□□□□□ -1.62
CPSF7-219ENST00000539952 MOB1AQ9H8S9 216 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 GCM1Q9NP62 436 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 TREM1Q9NP99 234 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 NECAP2Q9NVZ3 263 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 DCAF16Q9NXF7 216 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 COA4Q9NYJ1 87 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 GHRLQ9UBU3 117 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 CLN8Q9UBY8 286 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 KPTNQ9Y664 436 aa4.93□□□□□ -1.62
CPSF7-219ENST00000539952 CENPVL3A0A0U1RRI6 287 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 ZNF816-ZNF321PA0A0X1KG74 233 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 PSMD9O00233 223 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 CA11O75493 328 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 TOX4O94842 621 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 HTR3BO95264 441 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 SFT2D2O95562 160 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 CST4P01036 141 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 PRB2P02812 416 aaPredicted RBP4.92□□□□□ -1.62
CPSF7-219ENST00000539952 GAPDHP04406 335 aaKnown RBP4.92□□□□□ -1.62
CPSF7-219ENST00000539952 F13BP05160 661 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 S100A6P06703 90 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 SMIM6P0DI80 62 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 COX5BP10606 129 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 PTHLHP12272 177 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 KITLGP21583 273 aa4.92□□□□□ -1.62
CPSF7-219ENST00000539952 RAB5CP51148 216 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms