RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 DUX4L3P0CJ86 424 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 DUX4L4P0CJ87 422 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 DUX4L5P0CJ88 424 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 DUX4L6P0CJ89 424 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 DUX4L7P0CJ90 424 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 TNFRSF1AP19438 455 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 DUX4L9Q6RFH8 374 aaPredicted RBP18.73■□□□□ 0.59
HOMER3-204ENST00000539827 ACOT7LQ6ZUV0 252 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 KCNRGQ8N5I3 272 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 BVESQ8NE79 360 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 LRRC46Q96FV0 321 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 LURAP1Q96LR2 239 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 DUX4Q9UBX2 424 aa18.73■□□□□ 0.59
HOMER3-204ENST00000539827 A0A0D9SG52 128 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 K7N7A8 449 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 SIAH2O43255 324 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 SLC35G3Q8N808 338 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 LILRB1Q8NHL6 650 aaPredicted RBP18.72■□□□□ 0.59
HOMER3-204ENST00000539827 DYNLRB1Q9NP97 96 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 UBQLN2Q9UHD9 624 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 IGHV3-43A0A0B4J1X8 118 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 ODAMA1E959 279 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 OR2F2O95006 317 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 IGLV2-14P01704 120 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 GYPAP02724 150 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 IGHV3-43DP0DP04 118 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 APOBEC3AP31941 199 aaPredicted RBP18.72■□□□□ 0.59
HOMER3-204ENST00000539827 OR2F1Q13607 317 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 STUMQ69YW2 141 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 THOC7Q6I9Y2 204 aaKnown RBP18.72■□□□□ 0.59
HOMER3-204ENST00000539827 PRSS54Q6PEW0 395 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 ZNF695Q8IW36 515 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 SELENOHQ8IZQ5 122 aaKnown RBP18.72■□□□□ 0.59
HOMER3-204ENST00000539827 CCL13Q99616 98 aa18.72■□□□□ 0.59
HOMER3-204ENST00000539827 RAI1Q7Z5J4 1906 aaPredicted RBP18.71■□□□□ 0.59
HOMER3-204ENST00000539827 SCGB1D2O95969 90 aa18.71■□□□□ 0.59
HOMER3-204ENST00000539827 S100GP29377 79 aa18.71■□□□□ 0.59
HOMER3-204ENST00000539827 EDDM3BP56851 147 aa18.71■□□□□ 0.59
HOMER3-204ENST00000539827 PAX5Q02548 391 aa18.71■□□□□ 0.59
HOMER3-204ENST00000539827 INO80EQ8NBZ0 244 aaPredicted RBP18.71■□□□□ 0.59
HOMER3-204ENST00000539827 OR51H1Q8NH63 302 aa18.71■□□□□ 0.59
HOMER3-204ENST00000539827 EGLN1Q9GZT9 426 aa18.71■□□□□ 0.59
HOMER3-204ENST00000539827 SAP30LQ9HAJ7 183 aa18.71■□□□□ 0.59
HOMER3-204ENST00000539827 RNF150Q9ULK6 438 aa18.71■□□□□ 0.59
HOMER3-204ENST00000539827 RNF115Q9Y4L5 304 aa18.71■□□□□ 0.59
HOMER3-204ENST00000539827 DSCAMO60469 2012 aa18.71■□□□□ 0.59
HOMER3-204ENST00000539827 LINC00862A6NCI5 91 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 TUBAL3A6NHL2 446 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 PPP1CCP36873 323 aaKnown RBP18.7■□□□□ 0.58
HOMER3-204ENST00000539827 SRPXP78539 464 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 LTC4SQ16873 150 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 MST1LQ2TV78 715 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 OR8H3Q8N146 312 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 OR1S1Q8NH92 325 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 RRNAD1Q96FB5 475 aaKnown RBP18.7■□□□□ 0.58
HOMER3-204ENST00000539827 TMEM56Q96MV1 263 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 GAFA1Q96PS6 74 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 TMEM56-RWDD3S4R434 201 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 ROS1P08922 2347 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 C15orf65H3BRN8 121 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 F2RP25116 425 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 UCP1P25874 307 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 ZNF345Q14585 488 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 ZNF561Q8N587 486 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 SDSLQ96GA7 329 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 CNTNAP3BQ96NU0 1288 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 CNTNAP3Q9BZ76 1288 aa18.7■□□□□ 0.58
HOMER3-204ENST00000539827 CISD1Q9NZ45 108 aaKnown RBP18.7■□□□□ 0.58
HOMER3-204ENST00000539827 LSM5Q9Y4Y9 91 aaKnown RBP18.7■□□□□ 0.58
HOMER3-204ENST00000539827 H0Y980 276 aa18.69■□□□□ 0.58
HOMER3-204ENST00000539827 LYL1P12980 280 aa18.69■□□□□ 0.58
HOMER3-204ENST00000539827 P2RX3P56373 397 aa18.69■□□□□ 0.58
HOMER3-204ENST00000539827 FAM209AQ5JX71 171 aa18.69■□□□□ 0.58
HOMER3-204ENST00000539827 NINJ1Q92982 152 aa18.69■□□□□ 0.58
HOMER3-204ENST00000539827 AKR1E2Q96JD6 320 aa18.69■□□□□ 0.58
HOMER3-204ENST00000539827 OR2S2Q9NQN1 319 aa18.69■□□□□ 0.58
HOMER3-204ENST00000539827 TMED3Q9Y3Q3 217 aa18.69■□□□□ 0.58
HOMER3-204ENST00000539827 LRRC30A6NM36 301 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 SPINT2O43291 252 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 CLLU1Q5K131 121 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 TEX36Q5VZQ5 186 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 TRAT1Q6PIZ9 186 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 OR52M1Q8NGK5 317 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 PCNPQ8WW12 178 aaKnown RBP18.68■□□□□ 0.58
HOMER3-204ENST00000539827 ZNF665Q9H7R5 613 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 NBASA2RRP1 2371 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 KANTRA0A1W2PQU2 76 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 DEFB108AA8MXU0 73 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 CDS2O95674 445 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 DRAM1Q8N682 238 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 FAM216BQ8N7L0 139 aa18.68■□□□□ 0.58
HOMER3-204ENST00000539827 DIDO1Q9BTC0 2240 aaKnown RBP18.67■□□□□ 0.58
HOMER3-204ENST00000539827 MSGN1A6NI15 193 aa18.67■□□□□ 0.58
HOMER3-204ENST00000539827 BCL2L11O43521 198 aa18.67■□□□□ 0.58
HOMER3-204ENST00000539827 MUC1P15941 1255 aaPredicted RBP18.67■□□□□ 0.58
HOMER3-204ENST00000539827 UQCRFS1P47985 274 aa18.67■□□□□ 0.58
HOMER3-204ENST00000539827 RAB14P61106 215 aa18.67■□□□□ 0.58
HOMER3-204ENST00000539827 EFNB3Q15768 340 aa18.67■□□□□ 0.58
HOMER3-204ENST00000539827 ESCO2Q56NI9 601 aa18.67■□□□□ 0.58
HOMER3-204ENST00000539827 ZNF788Q6ZQV5 615 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms