RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SSPNQ14714 243 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 ZNF600Q6ZNG1 722 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 CYP2G1PQ6ZSU1 146 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 PPP1R32Q7Z5V6 425 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 LILRB2Q8N423 598 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 OR10A7Q8NGE5 316 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 RNASEH2CQ8TDP1 164 aaKnown RBP11.28□□□□□ -0.6
UBE3B-209ENST00000539584 FRZBQ92765 325 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 POM121L2Q96KW2 1035 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 PYGO2Q9BRQ0 406 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 ZNF665Q9H7R5 613 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 DLL3Q9NYJ7 618 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 B4GALT7Q9UBV7 327 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 CCL4P13236 92 aa11.27□□□□□ -0.61
UBE3B-209ENST00000539584 CCNOP22674 350 aa11.27□□□□□ -0.61
UBE3B-209ENST00000539584 TMEM267Q0VDI3 215 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-209ENST00000539584 LBHQ53QV2 105 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-209ENST00000539584 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-209ENST00000539584 OR51H1Q8NH63 302 aa11.27□□□□□ -0.61
UBE3B-209ENST00000539584 ZNF845Q96IR2 970 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-209ENST00000539584 HS3ST6Q96QI5 342 aa11.27□□□□□ -0.61
UBE3B-209ENST00000539584 GPR61Q9BZJ8 451 aa11.27□□□□□ -0.61
UBE3B-209ENST00000539584 TMEM9BQ9NQ34 198 aa11.27□□□□□ -0.61
UBE3B-209ENST00000539584 UFSP2Q9NUQ7 469 aa11.27□□□□□ -0.61
UBE3B-209ENST00000539584 MAP1LC3B2A6NCE7 125 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 H3BP45 60 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 DVL1O14640 695 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 SYNGR1O43759 233 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 SYNGR4O95473 234 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 HLA-HP01893 362 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 ZNF726P1Q15940 193 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 COA6Q5JTJ3 125 aaKnown RBP11.26□□□□□ -0.61
UBE3B-209ENST00000539584 LCN15Q6UWW0 184 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 C20orf204Q6ZNR8 217 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 Q6ZRM9 215 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 TAF15Q92804 592 aaKnown RBP eCLIP11.26□□□□□ -0.61
UBE3B-209ENST00000539584 GPHA2Q96T91 129 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 MAP1LC3BQ9GZQ8 125 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 ZNF552Q9H707 407 aaPredicted RBP11.26□□□□□ -0.61
UBE3B-209ENST00000539584 SLC39A9Q9NUM3 307 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 SMCO3A2RU48 225 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 J3QT63 122 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 HSPB6O14558 160 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 GDF9O60383 454 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 ZNF737O75373 536 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 METTL15P1P0C7V9 234 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 GPX4P36969 197 aaPredicted RBP11.26□□□□□ -0.61
UBE3B-209ENST00000539584 MEF2BQ02080 365 aaPredicted RBP11.26□□□□□ -0.61
UBE3B-209ENST00000539584 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 NCR3LG1Q68D85 454 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 TMEM183AQ8IXX5 376 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 BATF2Q8N1L9 274 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 BTF3L4Q96K17 158 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 FAM173AQ9BQD7 235 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 MANBALQ9NQG1 85 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 IL36RNQ9UBH0 155 aa11.26□□□□□ -0.61
UBE3B-209ENST00000539584 TRBV23-1A0A0A0MS06 115 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 CEBPZOSA8MTT3 80 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 HS3ST1O14792 307 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 SOX15O60248 233 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 KBTBD11O94819 623 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 NXPH3O95157 252 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 IGKV1-39P01597 117 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 IGLV2-14P01704 120 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 IGKV1D-39P04432 117 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 Q0VFX4 171 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 TESK1Q15569 626 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 MSMO1Q15800 293 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 TMEM14EPQ6UXP3 125 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 TCTEX1D1Q8N7M0 179 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 ANAPC16Q96DE5 110 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 ACY3Q96HD9 319 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 PACRGQ96M98 296 aaPredicted RBP11.25□□□□□ -0.61
UBE3B-209ENST00000539584 OR51I2Q9H344 312 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 SMOC1Q9H4F8 434 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 PRDM6Q9NQX0 595 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 DEPPQ9NTK1 212 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 POLDIP2Q9Y2S7 368 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 SIT1Q9Y3P8 196 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 IGKV1-5P01602 117 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 PSMB3P49720 205 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 LHX2P50458 406 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 C9orf152Q5JTZ5 239 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 ZNF497Q6ZNH5 498 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 RDH5Q92781 318 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 LHX4Q969G2 390 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 APH1AQ96BI3 265 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 OR5B12Q96R08 314 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 ZPBPQ9BS86 351 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 PRRG4Q9BZD6 226 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 MBNL3Q9NUK0 354 aaKnown RBP11.25□□□□□ -0.61
UBE3B-209ENST00000539584 PRSS50Q9UI38 385 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 SSUH2Q9Y2M2 353 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 WIPI2Q9Y4P8 454 aa11.25□□□□□ -0.61
UBE3B-209ENST00000539584 CTXND1A0A1B0GTU2 59 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 LY86O95711 162 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 IGHV3-9P01782 118 aa11.24□□□□□ -0.61
UBE3B-209ENST00000539584 PFN1P07737 140 aaKnown RBP11.24□□□□□ -0.61
UBE3B-209ENST00000539584 FABP4P15090 132 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms