RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 CD200R1LQ6Q8B3 271 aa12.49□□□□□ -0.41
CIT-210ENST00000539413 Q6ZPA2 131 aa12.49□□□□□ -0.41
CIT-210ENST00000539413 OR2W3Q7Z3T1 314 aa12.49□□□□□ -0.41
CIT-210ENST00000539413 WIPF2Q8TF74 440 aaPredicted RBP12.49□□□□□ -0.41
CIT-210ENST00000539413 ST6GALNAC6Q969X2 333 aa12.49□□□□□ -0.41
CIT-210ENST00000539413 URM1Q9BTM9 101 aaKnown RBP12.49□□□□□ -0.41
CIT-210ENST00000539413 KCNIP1Q9NZI2 227 aa12.49□□□□□ -0.41
CIT-210ENST00000539413 RRP15Q9Y3B9 282 aaKnown RBP12.49□□□□□ -0.41
CIT-210ENST00000539413 V9GY05 133 aa12.49□□□□□ -0.41
CIT-210ENST00000539413 IGHV3-72A0A0B4J1Y9 119 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 IGHV1-3A0A0C4DH29 117 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 TRDV1A0A1B0GX56 115 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 FBXO24O75426 580 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 IGKV1D-33P01593 117 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 IGKV1-33P01594 117 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 LPLP06858 475 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 CSF1P09603 554 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 TMEM11P17152 192 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 OR10A3P58181 314 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 HES1Q14469 280 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 HNF4GQ14541 408 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 GNMTQ14749 295 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 CT45A1Q5HYN5 189 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 HES5Q5TA89 166 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 SLC25A48Q6ZT89 311 aaKnown RBP12.48□□□□□ -0.41
CIT-210ENST00000539413 MOB3BQ86TA1 216 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 ZNF554Q86TJ5 538 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 LYG1Q8N1E2 194 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 FAM89BQ8N5H3 189 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 OR52L2PQ8NGH6 319 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 CT45A3Q8NHU0 189 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 FAM3DQ96BQ1 224 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 OR2S2Q9NQN1 319 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 MOB4Q9Y3A3 225 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 LRRC42Q9Y546 428 aa12.48□□□□□ -0.41
CIT-210ENST00000539413 TRAV1-2A0A0B4J238 106 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 FOXI3A8MTJ6 420 aaPredicted RBP12.47□□□□□ -0.41
CIT-210ENST00000539413 IL3RAP26951 378 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 PSMB9P28065 219 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 VEGFCP49767 419 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 PSMD7P51665 324 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 PLA2G7Q13093 441 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 HMGN3Q15651 99 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 C2orf76Q3KRA6 126 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 MORN2Q502X0 79 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 C9orf152Q5JTZ5 239 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 FAM110DQ8TAY7 271 aaPredicted RBP12.47□□□□□ -0.41
CIT-210ENST00000539413 RTN4IP1Q8WWV3 396 aaPredicted RBP12.47□□□□□ -0.41
CIT-210ENST00000539413 YTHDF1Q9BYJ9 559 aaKnown RBP12.47□□□□□ -0.41
CIT-210ENST00000539413 CHMP1AQ9HD42 196 aaPredicted RBP12.47□□□□□ -0.41
CIT-210ENST00000539413 PLEKHJ1Q9NW61 149 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 JPT1Q9UK76 154 aa12.47□□□□□ -0.41
CIT-210ENST00000539413 M0QZK8 103 aa12.46□□□□□ -0.41
CIT-210ENST00000539413 PDCD5O14737 125 aa12.46□□□□□ -0.41
CIT-210ENST00000539413 LDLRAD4O15165 306 aa12.46□□□□□ -0.41
CIT-210ENST00000539413 NAPSAO96009 420 aa12.46□□□□□ -0.41
CIT-210ENST00000539413 MYL9P24844 172 aa12.46□□□□□ -0.41
CIT-210ENST00000539413 PPP1CCP36873 323 aaKnown RBP12.46□□□□□ -0.41
CIT-210ENST00000539413 ZNF137PP52743 207 aa12.46□□□□□ -0.41
CIT-210ENST00000539413 TMEM50BP56557 158 aa12.46□□□□□ -0.41
CIT-210ENST00000539413 C22orf42Q6IC83 251 aa12.46□□□□□ -0.41
CIT-210ENST00000539413 SETD6Q8TBK2 473 aa12.46□□□□□ -0.41
CIT-210ENST00000539413 CITED2Q99967 270 aaPredicted RBP12.46□□□□□ -0.41
CIT-210ENST00000539413 HDHD3Q9BSH5 251 aaPredicted RBP12.46□□□□□ -0.41
CIT-210ENST00000539413 STEAP1Q9UHE8 339 aa12.46□□□□□ -0.41
CIT-210ENST00000539413 AK3Q9UIJ7 227 aa12.46□□□□□ -0.41
CIT-210ENST00000539413 TET2Q6N021 2002 aaPredicted RBP12.45□□□□□ -0.42
CIT-210ENST00000539413 TMEM272A0A1B0GTI8 110 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 ZNF736B4DX44 427 aaPredicted RBP12.45□□□□□ -0.42
CIT-210ENST00000539413 GALP22466 123 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 HTD2P86397 168 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 EBI3Q14213 229 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 NSUN5P1Q3KNT7 163 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 ZNF880Q6PDB4 577 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 ZNF773Q6PK81 442 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 TGIF2LXQ8IUE1 241 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 IZUMO1Q8IYV9 350 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 C5orf56Q8N8D9 126 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 FCGR1BQ92637 280 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 GALMQ96C23 342 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 RBMXL1Q96E39 390 aaKnown RBP12.45□□□□□ -0.42
CIT-210ENST00000539413 ARHGAP5-AS1Q96IT6 56 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 EAF1Q96JC9 268 aaPredicted RBP12.45□□□□□ -0.42
CIT-210ENST00000539413 HSF4Q9ULV5 492 aa12.45□□□□□ -0.42
CIT-210ENST00000539413 SMIM30A4D0T7 59 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 IFITM5A6NNB3 132 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 YPEL1O60688 119 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 RAB3BP20337 219 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 PLAC9Q5JTB6 97 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 STEAP3Q658P3 488 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 CENPVQ7Z7K6 275 aaPredicted RBP12.44□□□□□ -0.42
CIT-210ENST00000539413 NR2C2APQ86WQ0 139 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 ODF3L1Q8IXM7 274 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 Q8N6K4 173 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 OR5AU1Q8NGC0 362 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 IL1F10Q8WWZ1 152 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 YPEL2Q96QA6 119 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 ABHD14AQ9BUJ0 271 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 PECRQ9BY49 303 aa12.44□□□□□ -0.42
CIT-210ENST00000539413 ABRACLQ9P1F3 81 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms