RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PRAMEF6Q5VXH4 476 aa11.8□□□□□ -0.52
LIMK1-208ENST00000538333 ACP7Q6ZNF0 438 aa11.8□□□□□ -0.52
LIMK1-208ENST00000538333 OR8U1Q8NH10 309 aa11.8□□□□□ -0.52
LIMK1-208ENST00000538333 DSPP15924 2871 aaKnown RBP11.8□□□□□ -0.52
LIMK1-208ENST00000538333 KIAA1324LA8MWY0 1029 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-208ENST00000538333 FAM157AC9JC47 383 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 HSPA12AO43301 675 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 SERPINE2P07093 398 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 FABP6P51161 128 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 SWI5Q1ZZU3 235 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 BEND4Q6ZU67 534 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 TMEM171Q8WVE6 324 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 GPR146Q96CH1 333 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 MSL2Q9HCI7 577 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 PIGBOS1A0A0B4J2F0 54 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 A0A1B0GU03 582 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 TMEM30CPA0ZSE6 113 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 RNASEK-C17orf49H0YIS7 233 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 PAX9P55771 341 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 NHLH1Q02575 133 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 ASCL5Q7RTU5 278 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 HSD17B11Q8NBQ5 300 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 PRR7Q8TB68 274 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 SLC25A31Q9H0C2 315 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 CACFD1Q9UGQ2 172 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 FAM215AQ9Y5M1 114 aa11.79□□□□□ -0.52
LIMK1-208ENST00000538333 C9JQL5 133 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 TRIM77I1YAP6 450 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 CHST1O43916 411 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 CEACAM6P40199 344 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 FHITP49789 147 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 ZNF585BQ52M93 769 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 SLC35E4Q6ICL7 350 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 Q6ZRM9 215 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 C1orf174Q8IYL3 243 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 ZNF295-AS1Q8N0V1 137 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 LSM10Q969L4 123 aaKnown RBP11.78□□□□□ -0.52
LIMK1-208ENST00000538333 COQ2Q96H96 371 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 PPP1R3CQ9UQK1 317 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 BOD1L1Q8NFC6 3051 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 DCHS1Q96JQ0 3298 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 A6NLC8 198 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 C12orf77C9JDV5 145 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 AGPAT2O15120 278 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 C1QL1O75973 258 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 NXPH3O95157 252 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 PTBP3O95758 552 aaKnown RBP11.78□□□□□ -0.52
LIMK1-208ENST00000538333 ATF4P18848 351 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-208ENST00000538333 GCH1P30793 250 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 RAB5CP51148 216 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 VAMP2P63027 116 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 ZNF266Q14584 549 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 CLINT1Q14677 625 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 MSMPQ1L6U9 139 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 RPRMLQ8N4K4 120 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 DRAM1Q8N682 238 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 SCRT1Q9BWW7 348 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 UFSP2Q9NUQ7 469 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 LUZP4Q9P127 313 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 LAMA5O15230 3695 aa11.78□□□□□ -0.52
LIMK1-208ENST00000538333 K7EM74 188 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 F12P00748 615 aaPredicted RBP11.77□□□□□ -0.53
LIMK1-208ENST00000538333 IGKV1-5P01602 117 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 EPHA1P21709 976 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 OMGP23515 440 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 SNCAP37840 140 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 DVL1P1P54792 670 aaPredicted RBP11.77□□□□□ -0.53
LIMK1-208ENST00000538333 BAXQ07812 192 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 IZUMO4Q1ZYL8 232 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 MIDNQ504T8 468 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 ZNF474Q6S9Z5 364 aaPredicted RBP11.77□□□□□ -0.53
LIMK1-208ENST00000538333 RBMXL3Q8N7X1 1067 aaKnown RBP11.77□□□□□ -0.53
LIMK1-208ENST00000538333 OR1L1Q8NH94 360 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 STRAPQ9Y3F4 350 aaKnown RBP11.77□□□□□ -0.53
LIMK1-208ENST00000538333 CEP250Q9BV73 2442 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 K7N7A8 449 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 TFF1P04155 84 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 CD80P33681 288 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 OR3A1P47881 315 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 AESQ08117 197 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 OR5C1Q8NGR4 320 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 TOLLIPQ9H0E2 274 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 C19orf12Q9NSK7 152 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 LIN7CQ9NUP9 197 aaKnown RBP11.77□□□□□ -0.53
LIMK1-208ENST00000538333 KCNIP1Q9NZI2 227 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 KCNS2Q9ULS6 477 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 WASF3Q9UPY6 502 aa11.77□□□□□ -0.53
LIMK1-208ENST00000538333 RBM7Q9Y580 266 aaKnown RBP11.77□□□□□ -0.53
LIMK1-208ENST00000538333 OOEPA6NGQ2 149 aa11.76□□□□□ -0.53
LIMK1-208ENST00000538333 IFNL4K9M1U5 179 aa11.76□□□□□ -0.53
LIMK1-208ENST00000538333 CST7O76096 145 aa11.76□□□□□ -0.53
LIMK1-208ENST00000538333 TSPAN15O95858 294 aa11.76□□□□□ -0.53
LIMK1-208ENST00000538333 SFTA3P0C7M3 94 aa11.76□□□□□ -0.53
LIMK1-208ENST00000538333 ATP6V0CP27449 155 aa11.76□□□□□ -0.53
LIMK1-208ENST00000538333 CAMLGP49069 296 aa11.76□□□□□ -0.53
LIMK1-208ENST00000538333 DYNLT3P51808 116 aa11.76□□□□□ -0.53
LIMK1-208ENST00000538333 CACNA1DQ01668 2161 aa11.76□□□□□ -0.53
LIMK1-208ENST00000538333 COMMD1Q8N668 190 aa11.76□□□□□ -0.53
LIMK1-208ENST00000538333 GALMQ96C23 342 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms