RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MRPL14Q6P1L8 145 aaKnown RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 CLEC18BQ6UXF7 455 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 NTNG2Q96CW9 530 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 CXorf58Q96LI9 332 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 ABHD1Q96SE0 405 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 SSBP3Q9BWW4 388 aaPredicted RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 IGLV1-36A0A0B4J1U3 117 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 SYNGR2O43760 224 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 ZFP36L1Q07352 338 aaKnown RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 SRSF6Q13247 344 aaKnown RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 MIDNQ504T8 468 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 C10orf113Q5VZT2 155 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 OVCH2Q7RTZ1 564 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 ZNF561Q8N587 486 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 ANK1P16157 1881 aa4.62□□□□□ -1.67
LRP6-203ENST00000538239 TCF20Q9UGU0 1960 aaKnown RBP4.62□□□□□ -1.67
LRP6-203ENST00000538239 NDUFA2O43678 99 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 ZNF737O75373 536 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 FCGR3AP08637 254 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 SCTP09683 121 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 IGHV1-2P23083 117 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 WNT5AP41221 380 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 FABP9Q0Z7S8 132 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 IL13RA2Q14627 380 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 HCP5Q6MZN7 132 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 PCSK4Q6UW60 755 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 ABCA7Q8IZY2 2146 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 OR10Z1Q8NGY1 313 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 OR1L1Q8NH94 360 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 CHRNA10Q9GZZ6 450 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 WASHC3Q9Y3C0 194 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 ZIC3O60481 467 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 CECR9P0C854 216 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 FCER1GP30273 86 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 HOXA6P31267 233 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 OR4P4Q8NGL7 312 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 SLC2A9Q9NRM0 540 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 A0A1W2PP11 408 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 LIPFP07098 398 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 ZNF708P17019 499 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 HTR1DP28221 377 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 FAM201AQ5SY85 155 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 ATP5SQ99766 215 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 NKX6-2Q9C056 277 aaPredicted RBP4.61□□□□□ -1.67
LRP6-203ENST00000538239 GHITMQ9H3K2 345 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 CALYQ9NYX4 217 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 ARL2-SNX15V9GYD0 113 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 A0A1W2PRX2 142 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 MAP1LC3B2A6NCE7 125 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 TXNDC12O95881 172 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 ZNF137PP52743 207 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 TMEM50BP56557 158 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 OXA1LQ15070 435 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 PSG5Q15238 335 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 C4orf17Q53FE4 359 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 Q6ZNX1 250 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 RNASE6Q93091 150 aaKnown RBP4.61□□□□□ -1.67
LRP6-203ENST00000538239 MRPL24Q96A35 216 aaKnown RBP4.61□□□□□ -1.67
LRP6-203ENST00000538239 IMMP1LQ96LU5 166 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 MAP1LC3BQ9GZQ8 125 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 ZNF629Q9UEG4 869 aaPredicted RBP4.61□□□□□ -1.67
LRP6-203ENST00000538239 TGFAP01135 160 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 MGPP08493 103 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 LYZL2Q7Z4W2 148 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 ZNF645Q8N7E2 425 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 SIRT4Q9Y6E7 314 aaPredicted RBP4.61□□□□□ -1.67
LRP6-203ENST00000538239 A0A1W2PPQ1 181 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 NTN3O00634 580 aaPredicted RBP4.61□□□□□ -1.67
LRP6-203ENST00000538239 CDK2AP1O14519 115 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 WNT9BO14905 357 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 CA11O75493 328 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 REG1AP05451 166 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 SNRPCP09234 159 aaKnown RBP4.61□□□□□ -1.67
LRP6-203ENST00000538239 TRAPPC2P0DI81 140 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 TRAPPC2BP0DI82 140 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 RPL27AP46776 148 aaKnown RBP4.61□□□□□ -1.67
LRP6-203ENST00000538239 ATP6V1FQ16864 119 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 MARS2Q96GW9 593 aaKnown RBP4.61□□□□□ -1.67
LRP6-203ENST00000538239 TMEM106BQ9NUM4 274 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 SPRR3Q9UBC9 169 aa4.61□□□□□ -1.67
LRP6-203ENST00000538239 IGKV3D-11A0A0A0MRZ8 115 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 PINLYPA6NC86 204 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 B3GALNT1O75752 331 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 ORM1P02763 201 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 CELA3BP08861 270 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 FAM78BQ5VT40 261 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 SEZ6L2Q6UXD5 910 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 LINC00299Q6ZSB3 139 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 WDFY2Q96P53 400 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 RAB19A4D1S5 217 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 CGB1A6NKQ9 187 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 NPY1RP25929 384 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 CFHR1Q03591 330 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 EGR4Q05215 589 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 SOSTQ9BQB4 213 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 PITPNC1Q9UKF7 332 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 CACNA1CQ13936 2221 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 TCAPO15273 167 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 MPC2O95563 127 aa4.6□□□□□ -1.67
LRP6-203ENST00000538239 HPRT1P00492 218 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms