RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 SNIP1Q8TAD8 396 aaKnown RBP9.17□□□□□ -0.94
RTN3-208ENST00000537981 CORO2AQ92828 525 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 NEUROG1Q92886 237 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 C1orf159Q96HA4 380 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 SAMD10Q9BYL1 202 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 ZBP1Q9H171 429 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 PILRAQ9UKJ1 303 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 COLQQ9Y215 455 aaPredicted RBP9.17□□□□□ -0.94
RTN3-208ENST00000537981 ESPL1Q14674 2120 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 TRAV1-1A0A0B4J248 108 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 A0A1W2PRS3 328 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 CYR61O00622 381 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 CT45A8P0DMV1 189 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 CT45A9P0DMV2 189 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 ZNF20P17024 532 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 EPHA8P29322 1005 aaPredicted RBP9.16□□□□□ -0.94
RTN3-208ENST00000537981 CAPZBP47756 277 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 MEF2BQ02080 365 aaPredicted RBP9.16□□□□□ -0.94
RTN3-208ENST00000537981 SNAI3Q3KNW1 292 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 CT45A2Q5DJT8 189 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 ABHD12BQ7Z5M8 362 aaPredicted RBP9.16□□□□□ -0.94
RTN3-208ENST00000537981 BCORP1Q8N888 145 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 OR4B1Q8NGF8 309 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 GNPNAT1Q96EK6 184 aaPredicted RBP9.16□□□□□ -0.94
RTN3-208ENST00000537981 RCHY1Q96PM5 261 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 FBLN5Q9UBX5 448 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 ANXA10Q9UJ72 324 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 TRAV30A0A087WSZ9 112 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 HCRTR1O43613 425 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 GPR75O95800 540 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 RELBQ01201 579 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 EMC4Q5J8M3 183 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 LY6G5CQ5SRR4 150 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 AMMECR1LQ6DCA0 310 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 WBP2NLQ6ICG8 309 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 OR4A47Q6IF82 309 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 Q6ZPA2 131 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 TMEM144Q7Z5S9 345 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 OR2V1Q8NHB1 315 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 MRPL30Q8TCC3 161 aaKnown RBP9.16□□□□□ -0.94
RTN3-208ENST00000537981 COX14Q96I36 57 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 VSTM2LQ96N03 204 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 SLC46A2Q9BY10 475 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 ZDHHC11Q9H8X9 412 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 MBNL1Q9NR56 388 aaKnown RBP9.16□□□□□ -0.94
RTN3-208ENST00000537981 NOTCH4Q99466 2003 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 RP1P56715 2156 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 FRYLO94915 3013 aa9.16□□□□□ -0.94
RTN3-208ENST00000537981 OR5B21A6NL26 309 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 SYNGR4O95473 234 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 LIPFP07098 398 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 C8AP07357 584 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 PVRP15151 417 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 BLKP51451 505 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 RPL27P61353 136 aaKnown RBP9.15□□□□□ -0.94
RTN3-208ENST00000537981 ZP4Q12836 540 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 KIAA1644Q3SXP7 199 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.15□□□□□ -0.94
RTN3-208ENST00000537981 UEVLDQ8IX04 471 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 OR4F17Q8NGA8 305 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 OR4F5Q8NH21 305 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 SIGLEC12Q96PQ1 595 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 OR4F4Q96R69 305 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 PLK3Q9H4B4 646 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 ZNF286AQ9HBT8 521 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 PRDM6Q9NQX0 595 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 TBL2Q9Y4P3 447 aaKnown RBP9.15□□□□□ -0.94
RTN3-208ENST00000537981 WNT6Q9Y6F9 365 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 PCDH15Q96QU1 1955 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 CLEC18AA5D8T8 446 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 CRYAAP02489 173 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 COL8A2P25067 703 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 TLE3Q04726 772 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 ZNF468Q5VIY5 522 aaPredicted RBP9.15□□□□□ -0.94
RTN3-208ENST00000537981 FIGLAQ6QHK4 219 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 FAM89BQ8N5H3 189 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 CLEC18CQ8NCF0 446 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 MTIF3Q9H2K0 278 aaKnown RBP9.15□□□□□ -0.94
RTN3-208ENST00000537981 HCFC1R1Q9NWW0 138 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 CELSR3Q9NYQ7 3312 aa9.15□□□□□ -0.94
RTN3-208ENST00000537981 TRIOO75962 3097 aa9.15□□□□□ -0.95
RTN3-208ENST00000537981 IGLC7A0M8Q6 106 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 TAX1BP3O14907 124 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 RAB29O14966 203 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 RBFOX2O43251 390 aaKnown RBP eCLIP9.14□□□□□ -0.95
RTN3-208ENST00000537981 PMCHP20382 165 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 IL12BP29460 328 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 HLA-BQ31612 363 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 PRR27Q6MZM9 219 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 PRR22Q8IZ63 422 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 FAM19A2Q8N3H0 131 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 LRTM2Q8N967 370 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 APOOQ9BUR5 198 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 UBE2ZQ9H832 354 aaPredicted RBP9.14□□□□□ -0.95
RTN3-208ENST00000537981 SLC25A22Q9H936 323 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 ELOVL5Q9NYP7 299 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 TMEM131Q92545 1883 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 A0A0G2JRQ6 117 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 CELA3BP08861 270 aa9.14□□□□□ -0.95
RTN3-208ENST00000537981 SMIM10L1P0DMW3 83 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms