RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 OR13C8Q8NGS7 320 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 CREB3L1Q96BA8 519 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 ZNF2Q9BSG1 426 aaPredicted RBP12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 REG4Q9BYZ8 158 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 TAS2R3Q9NYW6 316 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 LPAR3Q9UBY5 353 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 F2RL2O00254 374 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 IFNA6P05013 189 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 NFYBP25208 207 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 FAUP35544 74 aaKnown RBP12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 TSPAN5P62079 268 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 AADACL3Q5VUY0 350 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 IDO2Q6ZQW0 420 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 CIARTQ8N365 385 aaPredicted RBP12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 OR10J5Q8NHC4 309 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 FOXC2Q99958 501 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 GINS4Q9BRT9 223 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 LINC00574Q9H8X3 128 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 OR2S2Q9NQN1 319 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 IDI2-AS1Q9NZ38 188 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 ZNRD1Q9P1U0 126 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 OPN4Q9UHM6 478 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 ITGB1BP2Q9UKP3 347 aa12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 PAIP2BQ9ULR5 123 aaKnown RBP12.85□□□□□ -0.35
SFSWAP-206ENST00000537582 AKAP9Q99996 3911 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 OR5H14A6NHG9 310 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 CENPXA8MT69 81 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 DISC1C4P0D8 188 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 HSPA12AO43301 675 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 HEXAP06865 529 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 FPR2P25090 351 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 SLC6A1P30531 599 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 CEACAM6P40199 344 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 FXYD4P59646 89 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 ARF6P62330 175 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 PLA1AQ53H76 456 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 H1FOOQ8IZA3 346 aaPredicted RBP12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 Q8N7P7 452 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 FAM210AQ96ND0 272 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 C7orf50Q9BRJ6 194 aaKnown RBP12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 FXYD6Q9H0Q3 95 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 MMP28Q9H239 520 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 GAL3ST2Q9H3Q3 398 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 RDH8Q9NYR8 311 aa12.84□□□□□ -0.35
SFSWAP-206ENST00000537582 IGKV1D-13A0A0B4J2D9 117 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 IGHV2-70DA0A0C4DH43 119 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 A0A1W2PPE3 182 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 NAP1L6A6NFF2 107 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 C17orf98A8MV24 154 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 SLC31A2O15432 143 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 FOXH1O75593 365 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 LIPFP07098 398 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 IGKV1-13P0DP09 117 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 BAMBIQ13145 260 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 CD276Q5ZPR3 534 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 MZT2BQ6NZ67 158 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 DHRS11Q6UWP2 260 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 LHFPL1Q86WI0 220 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 ARRDC1Q8N5I2 433 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 OR6F1Q8NGZ6 308 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 SUCNR1Q9BXA5 334 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 SLC2A8Q9NY64 477 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 GNG12Q9UBI6 72 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 ZNF69Q9UC07 566 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 FLVCR2Q9UPI3 526 aa12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 FLNBO75369 2602 aaKnown RBP12.83□□□□□ -0.36
SFSWAP-206ENST00000537582 FAM240BA0A1B0GVZ2 78 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 ENSAO43768 121 aaKnown RBP12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 TUSC2O75896 110 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 PPYP01298 95 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 CTXN2P0C2S0 81 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 IGHV1-8P0DP01 117 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 ZBTB25P24278 435 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 HTD2P86397 168 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 LOXL1Q08397 574 aaPredicted RBP12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 HEPN1Q6WQI6 88 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 TMEM17Q86X19 198 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 ENKURQ8TC29 256 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 MARCH1Q8TCQ1 289 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 DEDD2Q8WXF8 326 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 GFOD1Q9NXC2 390 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 DOCK11Q5JSL3 2073 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 ITPR3Q14573 2671 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 NOTCH2Q04721 2471 aa12.82□□□□□ -0.36
SFSWAP-206ENST00000537582 PI3P19957 117 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 GNG10P50151 68 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 ZNF134P52741 427 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 MORN2Q502X0 79 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 METTL11BQ5VVY1 283 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 TERB2Q8NHR7 220 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 GIMAP1Q8WWP7 306 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 TOMM40LQ969M1 308 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 UPRTQ96BW1 309 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 PRRT1Q99946 306 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 SIRT7Q9NRC8 400 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 JPT1Q9UK76 154 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 VSIG4Q9Y279 399 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 YLPM1P49750 1951 aaKnown RBP12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 TRAV6A0A075B6T7 132 aa12.81□□□□□ -0.36
SFSWAP-206ENST00000537582 ST8SIA5O15466 376 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms