RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ZNF880Q6PDB4 577 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 C6orf201Q7Z4U5 140 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 SPARTQ8N0X7 666 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 SVOPQ8N4V2 548 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 OR1L1Q8NH94 360 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 CAPSLQ8WWF8 208 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 URM1Q9BTM9 101 aaKnown RBP13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 FAAP24Q9BTP7 215 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 HSF4Q9ULV5 492 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 LRRC42Q9Y546 428 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 V9GY05 133 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 TRDV1A0A1B0GX56 115 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 LDLRAD4O15165 306 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 FGF16O43320 207 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 CSF1P09603 554 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 IL3RAP26951 378 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 BLVRBP30043 206 aaPredicted RBP13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 HMGN3Q15651 99 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 RAB11BQ15907 218 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 ABCA11PQ4W5N1 156 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 MORN2Q502X0 79 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 CT45A1Q5HYN5 189 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 NKAPLQ5M9Q1 402 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 IZUMO1Q8IYV9 350 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 OR51D1Q8NGF3 324 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 CT45A3Q8NHU0 189 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 RTN4IP1Q8WWV3 396 aaPredicted RBP13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 KCNIP1Q9NZI2 227 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 GNG12Q9UBI6 72 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 JPT1Q9UK76 154 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 MOB4Q9Y3A3 225 aa13.69□□□□□ -0.22
SFSWAP-205ENST00000537164 TRBV6-6A0A0A6YYG2 114 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 SLC31A2O15432 143 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 TXNL1O43396 289 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 FBXO24O75426 580 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 TMEM50BP56557 158 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 P2RY14Q15391 338 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 TMEM95Q3KNT9 176 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 Q6ZPA2 131 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 PRR18Q8N4B5 295 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 Q8N6K4 173 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 C11orf44Q8N8P7 122 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 FCGR1BQ92637 280 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 FAM3DQ96BQ1 224 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 RIMS4Q9H426 269 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 OR2S2Q9NQN1 319 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 PLEKHJ1Q9NW61 149 aa13.68□□□□□ -0.22
SFSWAP-205ENST00000537164 SHISA3A0PJX4 238 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 SOCS1O15524 211 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 YPEL1O60688 119 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 PEX14O75381 377 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 IGKV1D-33P01593 117 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 IGKV1-33P01594 117 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 CD28P10747 220 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 CD1BP29016 333 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 C2orf76Q3KRA6 126 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 ARSJQ5FYB0 599 aaPredicted RBP13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 MOB1BQ7L9L4 216 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 NDUFA11Q86Y39 141 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 C5orf56Q8N8D9 126 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 GALMQ96C23 342 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 YPEL2Q96QA6 119 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 STEAP1Q9UHE8 339 aa13.67□□□□□ -0.22
SFSWAP-205ENST00000537164 ADARB2-AS1A8MUL3 147 aa13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 PDCD5O14737 125 aa13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 LANCL1O43813 399 aa13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 LPLP06858 475 aa13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 TMEM11P17152 192 aa13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 FGF9P31371 208 aaPredicted RBP13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 REG1BP48304 166 aa13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 CLDN12P56749 244 aa13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 CD83Q01151 205 aa13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 HES1Q14469 280 aa13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 MOB3BQ86TA1 216 aa13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 OR10V1Q8NGI7 309 aa13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 EAF1Q96JC9 268 aaPredicted RBP13.66□□□□□ -0.22
SFSWAP-205ENST00000537164 IFITM5A6NNB3 132 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 RGS11O94810 467 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 GNMTQ14749 295 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 C5orf24Q7Z6I8 188 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 TGIF2LXQ8IUE1 241 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 ODF3L1Q8IXM7 274 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 OR5AU1Q8NGC0 362 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 OR52L2PQ8NGH6 319 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 OR56B1Q8NGI3 324 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 OR2T10Q8NGZ9 312 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 CITED2Q99967 270 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 ABHD14AQ9BUJ0 271 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 RAB22AQ9UL26 194 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 MGAT4AQ9UM21 535 aa13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 RRP15Q9Y3B9 282 aaKnown RBP13.65□□□□□ -0.22
SFSWAP-205ENST00000537164 PLXNB1O43157 2135 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 TMEM272A0A1B0GTI8 110 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 OPN1MWP04001 364 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 OPN1MW2P0DN77 364 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 OPN1MW3P0DN78 364 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 RAB3BP20337 219 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 MYL9P24844 172 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 PPP1CCP36873 323 aaKnown RBP13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 VEGFCP49767 419 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms