RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 THNSL2Q86YJ6 484 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 SPARTQ8N0X7 666 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 OR51D1Q8NGF3 324 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 ST6GALNAC6Q969X2 333 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 NDUFB11Q9NX14 153 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 GNG12Q9UBI6 72 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 IGHV1-3A0A0C4DH29 117 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 ZNF736B4DX44 427 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-206ENST00000536398 KCNAB3O43448 404 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 FBXO24O75426 580 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 IGKV1D-33P01593 117 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 IGKV1-33P01594 117 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 GAPDHP04406 335 aaKnown RBP11.35□□□□□ -0.59
UBE3B-206ENST00000536398 TMEM11P17152 192 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 TMEM50BP56557 158 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 OR10A3P58181 314 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 ZNF816Q0VGE8 651 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-206ENST00000536398 C2orf68Q2NKX9 166 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 NSUN5P1Q3KNT7 163 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 C2orf76Q3KRA6 126 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 C10orf99Q6UWK7 81 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 SLC25A48Q6ZT89 311 aaKnown RBP11.35□□□□□ -0.59
UBE3B-206ENST00000536398 OR8H3Q8N146 312 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 C8orf31Q8N9H6 132 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 DTX3Q8N9I9 347 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 CITED2Q99967 270 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-206ENST00000536398 HDHD3Q9BSH5 251 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-206ENST00000536398 OR2S2Q9NQN1 319 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 KCNIP1Q9NZI2 227 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 V9GY05 133 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 MEGF8Q7Z7M0 2845 aa11.35□□□□□ -0.59
UBE3B-206ENST00000536398 FOXI3A8MTJ6 420 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-206ENST00000536398 ADARB2-AS1A8MUL3 147 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 PEX14O75381 377 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 PPP1CCP36873 323 aaKnown RBP11.34□□□□□ -0.59
UBE3B-206ENST00000536398 MORN2Q502X0 79 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 UBE2UQ5VVX9 321 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 TRAT1Q6PIZ9 186 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 CD200R1LQ6Q8B3 271 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 OR2W3Q7Z3T1 314 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 FAM89BQ8N5H3 189 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 RTN4IP1Q8WWV3 396 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-206ENST00000536398 FAM3DQ96BQ1 224 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 AKR1E2Q96JD6 320 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 PLEKHJ1Q9NW61 149 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 AK3Q9UIJ7 227 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 MOB4Q9Y3A3 225 aa11.34□□□□□ -0.59
UBE3B-206ENST00000536398 RRP15Q9Y3B9 282 aaKnown RBP11.34□□□□□ -0.59
UBE3B-206ENST00000536398 TET2Q6N021 2002 aaPredicted RBP11.34□□□□□ -0.59
UBE3B-206ENST00000536398 A0A0B4J203 849 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 TMEM272A0A1B0GTI8 110 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 TRDV1A0A1B0GX56 115 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 SMIM30A4D0T7 59 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 LDLRAD4O15165 306 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 WIPF1O43516 503 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 NAPSAO96009 420 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 PSMB9P28065 219 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 VEGFCP49767 419 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 HMGN3Q15651 99 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 TCTEX1D4Q5JR98 221 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 C22orf42Q6IC83 251 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 CENPVQ7Z7K6 275 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-206ENST00000536398 NR2C2APQ86WQ0 139 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 C5orf56Q8N8D9 126 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 OR5AU1Q8NGC0 362 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 SETD6Q8TBK2 473 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 ARHGAP5-AS1Q96IT6 56 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 EAF1Q96JC9 268 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-206ENST00000536398 URM1Q9BTM9 101 aaKnown RBP11.33□□□□□ -0.6
UBE3B-206ENST00000536398 Q9H521 79 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 CHMP1AQ9HD42 196 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-206ENST00000536398 LRRC42Q9Y546 428 aa11.33□□□□□ -0.6
UBE3B-206ENST00000536398 TRAV1-2A0A0B4J238 106 aa11.32□□□□□ -0.6
UBE3B-206ENST00000536398 MRPS14O60783 128 aaKnown RBP11.32□□□□□ -0.6
UBE3B-206ENST00000536398 EBI3Q14213 229 aa11.32□□□□□ -0.6
UBE3B-206ENST00000536398 Q3ZCU0 254 aa11.32□□□□□ -0.6
UBE3B-206ENST00000536398 ZNF880Q6PDB4 577 aa11.32□□□□□ -0.6
UBE3B-206ENST00000536398 C1QL4Q86Z23 238 aa11.32□□□□□ -0.6
UBE3B-206ENST00000536398 ODF3L1Q8IXM7 274 aa11.32□□□□□ -0.6
UBE3B-206ENST00000536398 SVOPQ8N4V2 548 aa11.32□□□□□ -0.6
UBE3B-206ENST00000536398 Q8N6K4 173 aa11.32□□□□□ -0.6
UBE3B-206ENST00000536398 YTHDF1Q9BYJ9 559 aaKnown RBP11.32□□□□□ -0.6
UBE3B-206ENST00000536398 STEAP1Q9UHE8 339 aa11.32□□□□□ -0.6
UBE3B-206ENST00000536398 A0A1W2PRX2 142 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 LINC01548A6NM66 108 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 IL3RAP26951 378 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 ZNF137PP52743 207 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 HTD2P86397 168 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 DEFA6Q01524 100 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 MOGAT2Q3SYC2 334 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 PLAC9Q5JTB6 97 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 ZNF554Q86TJ5 538 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 TGIF2LXQ8IUE1 241 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 IZUMO1Q8IYV9 350 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 IL1F10Q8WWZ1 152 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 GALMQ96C23 342 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 NOL4LQ96MY1 436 aaPredicted RBP11.31□□□□□ -0.6
UBE3B-206ENST00000536398 ABHD14AQ9BUJ0 271 aa11.31□□□□□ -0.6
UBE3B-206ENST00000536398 PECRQ9BY49 303 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms