RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 DNASE1L1P49184 302 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 TMEM50BP56557 158 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 TPPP2P59282 170 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 SRPXP78539 464 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 RPL24P83731 157 aaKnown RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 TMEM267Q0VDI3 215 aaPredicted RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 ZNF266Q14584 549 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 IL13RA2Q14627 380 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 GABRA6Q16445 453 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 TMEM52BQ4KMG9 183 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 PHYHD1Q5SRE7 291 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 PLCXD3Q63HM9 321 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 HSD11B1LQ7Z5J1 315 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 ODF3L1Q8IXM7 274 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 LGI3Q8N145 548 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 BATF2Q8N1L9 274 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 MTURNQ8N3F0 131 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 KIR3DL3Q8N743 410 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 MFSD9Q8NBP5 474 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 OR5H2Q8NGV7 314 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 OR4S2Q8NH73 311 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 GLYATL1Q969I3 302 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 PTX4Q96A99 478 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 GPER1Q99527 375 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 OR51I2Q9H344 312 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 GPR27Q9NS67 375 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 EMC9Q9Y3B6 208 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 RHBDD3Q9Y3P4 386 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 ATG2BQ96BY7 2078 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 SHANK1Q9Y566 2161 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 BRWD1Q9NSI6 2320 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 ABCA7Q8IZY2 2146 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 FAM230AA0A1W2PPH8 454 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 C11orf98E9PRG8 122 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 H0Y8G0 127 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 SLC17A3O00476 420 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 WISP1O95388 367 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 TMEM50AO95807 157 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 TMEM225BP0DP42 221 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 ZNF10P21506 573 aaPredicted RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 RPS4Y1P22090 263 aaKnown RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 CD1BP29016 333 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 CORO1AP31146 461 aaKnown RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 AMTP48728 403 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 EMP2P54851 167 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 RHOGP84095 191 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 MGAT2Q10469 447 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 MORN2Q502X0 79 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 TXNDC8Q6A555 127 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 WDR82Q6UXN9 313 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 LINC00114Q6XXX2 140 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 FAM57BQ71RH2 274 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 PARS2Q7L3T8 475 aaKnown RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 LINC00346Q8IVM7 164 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 ZNF595Q8IYB9 648 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 FBXL14Q8N1E6 418 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 LFNGQ8NES3 379 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 OR4N2Q8NGD1 307 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 BAHD1Q8TBE0 780 aaPredicted RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 RPS4Y2Q8TD47 263 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 KCNE4Q8WWG9 221 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 RAB37Q96AX2 223 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 SLAMF6Q96DU3 332 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 ALG14Q96F25 216 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 PERPQ96FX8 193 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 LIN37Q96GY3 246 aaPredicted RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 PYGO2Q9BRQ0 406 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 Q9N2K0 584 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 HIF1ANQ9NWT6 349 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 B4GALT6Q9UBX8 382 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 NSG2Q9Y328 171 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 MYOFQ9NZM1 2061 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 hDV102S1A0JD36 115 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 ZNF878C9JN71 531 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 K7ESM1 405 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 SIVA1O15304 175 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 NDUFS4O43181 175 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 GYPAP02724 150 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 HPNP05981 417 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 CISD3P0C7P0 127 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 BCL2P10415 239 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 OPRM1P35372 400 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 GABRA2P47869 451 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 SNU13P55769 128 aaKnown RBP3.19□□□□□ -1.9
MCF2-210ENST00000536274 RANP62826 216 aaKnown RBP3.19□□□□□ -1.9
MCF2-210ENST00000536274 PDCD1Q15116 288 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 PMCHL1Q16048 86 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 PRTGQ2VWP7 1150 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 ACOT6Q3I5F7 207 aaPredicted RBP3.19□□□□□ -1.9
MCF2-210ENST00000536274 SIGLECL1Q8N7X8 197 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 ZNF721Q8TF20 911 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 NAT6Q93015 286 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 ZNF479Q96JC4 524 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 JMJD8Q96S16 334 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 SDF2Q99470 211 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 PMCHL2Q9BQD1 86 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 TM2D1Q9BX74 207 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 AKIRIN1Q9H9L7 192 aaPredicted RBP3.19□□□□□ -1.9
MCF2-210ENST00000536274 PELI2Q9HAT8 420 aa3.19□□□□□ -1.9
MCF2-210ENST00000536274 C1orf123Q9NWV4 160 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms