RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 MORN2Q502X0 79 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 MOB1BQ7L9L4 216 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CROCCP3Q8IVE0 287 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 LINC00311Q8N616 119 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 C8orf31Q8N9H6 132 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 OR5R1Q8NH85 324 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SETD6Q8TBK2 473 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 RIMS4Q9H426 269 aaPredicted RBP9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 OR2S2Q9NQN1 319 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 KCNIP1Q9NZI2 227 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 C1RLQ9NZP8 487 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 GNG12Q9UBI6 72 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ETV7Q9Y603 341 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 IGKV1-6A0A0C4DH72 117 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 A0A1W2PPI3 338 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 BTBD17A6NE02 478 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SERPINE3A8MV23 424 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 LEUTXA8MZ59 168 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TMEM127O75204 238 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SCTP09683 121 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CD3GP09693 182 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CD24P25063 80 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 RPL5P46777 297 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 DYNLT3P51808 116 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 HLA-DRB3P79483 266 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 HERPUD1Q15011 391 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TMEM30BQ3MIR4 351 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ZNF260Q3ZCT1 412 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 Q3ZCU0 254 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CDNFQ49AH0 187 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CT45A1Q5HYN5 189 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SLC25A48Q6ZT89 311 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CT45A3Q8NHU0 189 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 IL1F10Q8WWZ1 152 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 GALMQ96C23 342 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 OCSTAMPQ9BR26 566 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 PARP12Q9H0J9 701 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 RAB9BQ9NP90 201 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ABRACLQ9P1F3 81 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ZNF230Q9UIE0 474 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 JPT1Q9UK76 154 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TCF19Q9Y242 345 aa9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 AMMECR1Q9Y4X0 333 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF1A-208ENST00000536194 A6NDX4 124 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TMEM235A6NFC5 223 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 POM121CA8CG34 1229 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SSX5O60225 188 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 YPEL1O60688 119 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CEACAM3P40198 252 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 COMPP49747 757 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 MADCAM1Q13477 382 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SPCS2Q15005 226 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 HACD4Q5VWC8 232 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TMEM219Q86XT9 240 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CLVS1Q8IUQ0 354 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ODF3L1Q8IXM7 274 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 IZUMO1Q8IYV9 350 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 OR10X1Q8NGY0 326 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 NUDCD2Q8WVJ2 157 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 MAFIPQ8WZ33 124 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CFHR4Q92496 578 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 GCDHQ92947 438 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TOMM40LQ969M1 308 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ST6GALNAC6Q969X2 333 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 RPEQ96AT9 228 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CREB3L1Q96BA8 519 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 YPEL2Q96QA6 119 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ABCG5Q9H222 651 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 DCSTAMPQ9H295 470 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 OR1A1Q9P1Q5 309 aa9.09□□□□□ -0.95
TNFRSF1A-208ENST00000536194 COL6A5A8TX70 2615 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 IGKV1D-8A0A087WSZ0 117 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 OOSP1A8MZH6 123 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 TRDCB7Z8K6 153 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 HSD17B6O14756 317 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 SCGNO76038 276 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 GSTP1P09211 210 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 PTHLHP12272 177 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 MDKP21741 143 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 REG1BP48304 166 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 ZNF137PP52743 207 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 RPL15P61313 204 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 ZNF816Q0VGE8 651 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 ARFRP1Q13795 201 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 AWAT1Q58HT5 328 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 Q6ZSV7 163 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 SAMD12Q8N8I0 201 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 DTX3Q8N9I9 347 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 SPATA3Q8NHX4 192 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 KCTD12Q96CX2 325 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 RBMXL1Q96E39 390 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 ABHD14AQ9BUJ0 271 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 IFI27L2Q9H2X8 130 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 ABCB10Q9NRK6 738 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 SLC23A1Q9UHI7 598 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 MGAT4AQ9UM21 535 aa9.08□□□□□ -0.96
TNFRSF1A-208ENST00000536194 TRAV18A0A075B6X5 111 aa9.07□□□□□ -0.96
TNFRSF1A-208ENST00000536194 A0A0A6YYH2 397 aa9.07□□□□□ -0.96
TNFRSF1A-208ENST00000536194 IGHV1-3A0A0C4DH29 117 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms