RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CACNG2Q9Y698 323 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 BIRC6Q9NR09 4857 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 DNAH7Q8WXX0 4024 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 EXOC1LA0A1B0GW35 172 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 XKRY2A2RUG3 117 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 C5orf49A4QMS7 147 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 METTL21EPA6NDL7 271 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 H3BUX3 64 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 M0R1W7 72 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 DLGAP1O14490 977 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 POLR3GO15318 223 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 NBR2O15453 112 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 GMDSO60547 372 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 NPIPB7O75200 414 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 ZNF780AO75290 641 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 CA11O75493 328 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 WBP4O75554 376 aaKnown RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 ATP5LO75964 103 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 KRT75O95678 551 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 CD28P10747 220 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 MUC1P15941 1255 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 TCP1P17987 556 aaKnown RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 ELK1P19419 428 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 FUT3P21217 361 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 VDAC2P45880 294 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 RPS5P46782 204 aaKnown RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 AQP5P55064 265 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 DLX1P56177 255 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 DR1Q01658 176 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 ECH1Q13011 328 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 PSG7Q13046 419 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 KCTD19Q17RG1 926 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 NDUFAF6Q330K2 333 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 LIN52Q52LA3 116 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 LRRC10Q5BKY1 277 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 FAM27D1Q5T7N8 215 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 CARD17Q5XLA6 110 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 PYHIN1Q6K0P9 492 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 ULK3Q6PHR2 472 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 VMO1Q7Z5L0 202 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 CAMK2N1Q7Z7J9 78 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 MKXQ8IYA7 352 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 ZNF101Q8IZC7 436 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 TMEM123Q8N131 208 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 LINC01561Q8N1V8 128 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 Q8N2B8 174 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 COMMD1Q8N668 190 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 NKAPP1Q8N9T2 125 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 OR8G5Q8NG78 346 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 OR52H1Q8NGJ2 320 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 OR52I1Q8NGK6 324 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 OR56B4Q8NH76 319 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 CLHC1Q8NHS4 586 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 RPS4Y2Q8TD47 263 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 C10orf82Q8WW14 230 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 GEMIN6Q8WXD5 167 aaKnown RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 DCUN1D4Q92564 292 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 CIDECQ96AQ7 238 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 RASD2Q96D21 266 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 CMBLQ96DG6 245 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 MALSU1Q96EH3 234 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 L3HYPDHQ96EM0 354 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 PELI1Q96FA3 418 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 NOL4LQ96MY1 436 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 TSPAN32Q96QS1 320 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 SH3GL3Q99963 347 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 TMEM43Q9BTV4 400 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 GON7Q9BXV9 100 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 MFFQ9GZY8 342 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 DNTTIP1Q9H147 329 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 OR51B6Q9H340 312 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 OR51I1Q9H343 314 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 METTL8Q9H825 291 aaKnown RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 NIPAL2Q9H841 368 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 MEAF6Q9HAF1 191 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 TMEM27Q9HBJ8 222 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 TMEM38BQ9NVV0 291 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 KAAG1Q9UBP8 84 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 ZNF225Q9UK10 706 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 IKZF2Q9UKS7 526 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 UTP11Q9Y3A2 253 aaKnown RBP2.26□□□□□ -2.05
SNHG1-202ENST00000535689 TIMM22Q9Y584 194 aa2.26□□□□□ -2.05
SNHG1-202ENST00000535689 A0A087WUJ7 227 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 A0A1W2PRG6 482 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 CLDN24A6NM45 220 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 A8MT66 165 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 C12orf71A8MTZ7 269 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 H0YHG0 523 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 DCTN6O00399 190 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 XKRYO14609 159 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 SLC31A2O15432 143 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 RGS16O15492 202 aaPredicted RBP2.25□□□□□ -2.05
SNHG1-202ENST00000535689 RNF13O43567 381 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 NDUFB3O43676 98 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 SOX15O60248 233 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 DIRAS1O95057 198 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 C6orf47O95873 294 aa2.25□□□□□ -2.05
SNHG1-202ENST00000535689 SNRPAP09012 282 aaKnown RBP2.25□□□□□ -2.05
SNHG1-202ENST00000535689 CST2P09228 141 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms