RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 HOXA4Q00056 320 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-214ENST00000535493 OR8B8Q15620 311 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 H1FOOQ8IZA3 346 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-214ENST00000535493 FAM185AQ8N0U4 392 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 OR10D3Q8NH80 312 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 OR2V1Q8NHB1 315 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 SNIP1Q8TAD8 396 aaKnown RBP11.42□□□□□ -0.58
HDAC4-214ENST00000535493 OR4C12Q96R67 309 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 MAP1LC3B2A6NCE7 125 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 LRRC3CA6NJW4 275 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 ZNF716A6NP11 495 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 CCL4P13236 92 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 CEACAM1P13688 526 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 EGR1P18146 543 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 SSR4P51571 173 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 CD81P60033 236 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 GNB2P62879 340 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 OR8G1Q15617 311 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 RPP25LQ8N5L8 163 aaKnown RBP11.41□□□□□ -0.58
HDAC4-214ENST00000535493 OR13D1Q8NGV5 346 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 LHX4Q969G2 390 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 MAP1LC3BQ9GZQ8 125 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 CISD1Q9NZ45 108 aaKnown RBP11.41□□□□□ -0.58
HDAC4-214ENST00000535493 KNTC1P50748 2209 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 ADAMTS20P59510 1910 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 MDH2P40926 338 aaKnown RBP11.41□□□□□ -0.58
HDAC4-214ENST00000535493 RAC3P60763 192 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 MRPL14Q6P1L8 145 aaKnown RBP11.41□□□□□ -0.58
HDAC4-214ENST00000535493 RPS19BP1Q86WX3 136 aaKnown RBP11.41□□□□□ -0.58
HDAC4-214ENST00000535493 ZNF525Q8N782 197 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 CADM4Q8NFZ8 388 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 GPR35Q9HC97 309 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 IL36GQ9NZH8 169 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 PITPNC1Q9UKF7 332 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 WASF3Q9UPY6 502 aa11.41□□□□□ -0.58
HDAC4-214ENST00000535493 IGHV1-45A0A0A0MS14 117 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 SYNGR2O43760 224 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 TUSC2O75896 110 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 IL18BPO95998 194 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 IGKV1-5P01602 117 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 CD33P20138 364 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 RND2P52198 227 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 PMP22Q01453 160 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 SSX2Q16385 188 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 SPINK9Q5DT21 86 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 NCR3LG1Q68D85 454 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 OR5D13Q8NGL4 314 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 OR10J5Q8NHC4 309 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 KCNS2Q9ULS6 477 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 FUT9Q9Y231 359 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 ATP23Q9Y6H3 246 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 H0Y980 276 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 ST8SIA5O15466 376 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 SOX15O60248 233 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 RHBDL1O75783 438 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 DFFBO76075 338 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 IDH3GP51553 393 aaPredicted RBP11.4□□□□□ -0.58
HDAC4-214ENST00000535493 CASP6P55212 293 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 MLF1P58340 268 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 ZXDAP98168 799 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 Q3ZCU0 254 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 TMPRSS7Q7RTY8 843 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 GGNQ86UU5 652 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 TMEM183AQ8IXX5 376 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 CPT1CQ8TCG5 803 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 HLA-CQ95604 372 aa11.4□□□□□ -0.58
HDAC4-214ENST00000535493 CLEC18AA5D8T8 446 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 B4DEV8 164 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 TRAPPC2LH3BP13 241 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 EREGO14944 169 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 IFNA10P01566 189 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 OR4A8P0C604 315 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 COX6A1P12074 109 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 FKBP2P26885 142 aaKnown RBP11.39□□□□□ -0.59
HDAC4-214ENST00000535493 G0S2P27469 103 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 FAM3BP58499 235 aaPredicted RBP11.39□□□□□ -0.59
HDAC4-214ENST00000535493 TAS2R60P59551 318 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 SSTP61278 116 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 CLEC18CQ8NCF0 446 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 OR10V1Q8NGI7 309 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 MRPL30Q8TCC3 161 aaKnown RBP11.39□□□□□ -0.59
HDAC4-214ENST00000535493 SLC39A9Q9NUM3 307 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 PRSS50Q9UI38 385 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 CD300LBA8K4G0 201 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 A8MWP6 167 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 CBR3O75828 277 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 OPN1MWP04001 364 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 OPN1MW2P0DN77 364 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 OPN1MW3P0DN78 364 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 SELEP16581 610 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 COL8A2P25067 703 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 B3GALT5-AS1P59052 145 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 PMS2P11Q13670 270 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 SPATA46Q5T0L3 261 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 OR1P1Q8NH06 330 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 CLDN23Q96B33 292 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 CDH20Q9HBT6 801 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 RNF150Q9ULK6 438 aa11.39□□□□□ -0.59
HDAC4-214ENST00000535493 TRBV24-1A0A075B6N3 115 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms