RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 SMIM7Q9BQ49 75 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 DEFB126Q9BYW3 111 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 OR10A2Q9H208 303 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 OCIAD1Q9NX40 245 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 WIPI2Q9Y4P8 454 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 CHCHD2Q9Y6H1 151 aaPredicted RBP16.46■□□□□ 0.23
SMPD1-210ENST00000534405 IGKV1D-8A0A087WSZ0 117 aa16.45■□□□□ 0.22
SMPD1-210ENST00000534405 PROB1E7EW31 1015 aa16.45■□□□□ 0.22
SMPD1-210ENST00000534405 OMGP23515 440 aa16.45■□□□□ 0.22
SMPD1-210ENST00000534405 DYNLT3P51808 116 aa16.45■□□□□ 0.22
SMPD1-210ENST00000534405 TPPP2P59282 170 aa16.45■□□□□ 0.22
SMPD1-210ENST00000534405 RPL19P84098 196 aaKnown RBP16.45■□□□□ 0.22
SMPD1-210ENST00000534405 FADS6Q8N9I5 356 aa16.45■□□□□ 0.22
SMPD1-210ENST00000534405 M0QZ24 198 aa16.45■□□□□ 0.22
SMPD1-210ENST00000534405 TRAPPC6AO75865 159 aa16.45■□□□□ 0.22
SMPD1-210ENST00000534405 GCH1P30793 250 aa16.45■□□□□ 0.22
SMPD1-210ENST00000534405 COMPP49747 757 aaPredicted RBP16.45■□□□□ 0.22
SMPD1-210ENST00000534405 RTN4IP1Q8WWV3 396 aaPredicted RBP16.45■□□□□ 0.22
SMPD1-210ENST00000534405 MBD3L1Q8WWY6 194 aa16.45■□□□□ 0.22
SMPD1-210ENST00000534405 REPIN1Q9BWE0 567 aaKnown RBP16.45■□□□□ 0.22
SMPD1-210ENST00000534405 IGHV2OR16-5A0A0B4J2B6 119 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 AQP7P3A6NL99 342 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 NDUFS8O00217 210 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 KBTBD11O94819 623 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 CTRLP40313 264 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 CRIP3Q6Q6R5 217 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 PGAM5Q96HS1 289 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 MANBALQ9NQG1 85 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 UQCR10Q9UDW1 63 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 F6UZH7 168 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 ONECUT2O95948 504 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 CCL1P22362 96 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 CDKN1AP38936 164 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 CXCL12P48061 93 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 CLDN17P56750 224 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 PHYHD1Q5SRE7 291 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 MRPL14Q6P1L8 145 aaKnown RBP16.44■□□□□ 0.22
SMPD1-210ENST00000534405 MRGPRGQ86SM5 289 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 VN1R17PQ8TDU5 208 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 SSC4DQ8WTU2 575 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 LIN37Q96GY3 246 aaPredicted RBP16.44■□□□□ 0.22
SMPD1-210ENST00000534405 WNT16Q9UBV4 365 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 ST3GAL6Q9Y274 331 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 PXMP4Q9Y6I8 212 aa16.44■□□□□ 0.22
SMPD1-210ENST00000534405 VPS13AQ96RL7 3174 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 CNTRLQ7Z7A1 2325 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 ESDP10768 282 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 RPS20P60866 119 aaKnown RBP16.43■□□□□ 0.22
SMPD1-210ENST00000534405 BAXQ07812 192 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 C1QL2Q7Z5L3 287 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 ODF3L1Q8IXM7 274 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 OR5D18Q8NGL1 313 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 PECRQ9BY49 303 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 CEBPZOSA8MTT3 80 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 SERPINE3A8MV23 424 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 MMP23AO75900 390 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 S100A7P31151 101 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 OR56B2PQ8NGI1 322 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 OR2V1Q8NHB1 315 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 LYZL4Q96KX0 146 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 TRAPPC1Q9Y5R8 145 aa16.43■□□□□ 0.22
SMPD1-210ENST00000534405 SDK2Q58EX2 2172 aa16.42■□□□□ 0.22
SMPD1-210ENST00000534405 LRRC3CA6NJW4 275 aa16.42■□□□□ 0.22
SMPD1-210ENST00000534405 CDS2O95674 445 aa16.42■□□□□ 0.22
SMPD1-210ENST00000534405 RTP5Q14D33 572 aa16.42■□□□□ 0.22
SMPD1-210ENST00000534405 PCOLCEQ15113 449 aa16.42■□□□□ 0.22
SMPD1-210ENST00000534405 RSPO4Q2I0M5 234 aaPredicted RBP16.42■□□□□ 0.22
SMPD1-210ENST00000534405 ABCA11PQ4W5N1 156 aa16.42■□□□□ 0.22
SMPD1-210ENST00000534405 MYO7BQ6PIF6 2116 aa16.42■□□□□ 0.22
SMPD1-210ENST00000534405 SAP25Q8TEE9 199 aa16.42■□□□□ 0.22
SMPD1-210ENST00000534405 TRAV30A0A087WSZ9 112 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 TMEM41BQ5BJD5 291 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 KCNIP4Q6PIL6 250 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 OR51T1Q8NGJ9 327 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 CLDN23Q96B33 292 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 GPER1Q99527 375 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 LIME1Q9H400 295 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 ZNF701Q9NV72 531 aaPredicted RBP16.41■□□□□ 0.22
SMPD1-210ENST00000534405 C19orf25Q9UFG5 118 aaPredicted RBP16.41■□□□□ 0.22
SMPD1-210ENST00000534405 IGHV3-15A0A0B4J1V0 119 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 ZNF728P0DKX0 622 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 ACSF3Q4G176 576 aaPredicted RBP16.41■□□□□ 0.22
SMPD1-210ENST00000534405 OCIAD2Q56VL3 154 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 C1orf185Q5T7R7 199 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 DOK3Q7L591 496 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 TMPRSS7Q7RTY8 843 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 WDYHV1Q96HA8 205 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 ATP5SQ99766 215 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 DUSP23Q9BVJ7 150 aa16.41■□□□□ 0.22
SMPD1-210ENST00000534405 IFNA1P01562 189 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 BMP5P22003 454 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 IL3RAP26951 378 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 NKX2-1P43699 371 aaPredicted RBP16.4■□□□□ 0.22
SMPD1-210ENST00000534405 TSPO2Q5TGU0 170 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 UNQ5815/PRO19632Q6UWF5 114 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 BTF3L4Q96K17 158 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 HSPB9Q9BQS6 159 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 OR6C6A6NF89 314 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 ZNF726P1Q15940 193 aa16.4■□□□□ 0.22
SMPD1-210ENST00000534405 LCN15Q6UWW0 184 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms