RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 GNG13Q9P2W3 67 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 SIT1Q9Y3P8 196 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 WSB1Q9Y6I7 421 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 ZFP92A6NM28 416 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 PITX3O75364 302 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 MRPL33O75394 65 aaKnown RBP16.53■□□□□ 0.24
CAPN1-226ENST00000533820 CNOT4O95628 575 aaKnown RBP16.53■□□□□ 0.24
CAPN1-226ENST00000533820 CELA3AP09093 270 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 MRPL21Q7Z2W9 205 aaKnown RBP16.53■□□□□ 0.24
CAPN1-226ENST00000533820 WDR5BQ86VZ2 330 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 Q8NFD4 153 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 Q8WTZ3 238 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 RSG1Q9BU20 258 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 SLC25A31Q9H0C2 315 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 DOCK11Q5JSL3 2073 aa16.53■□□□□ 0.24
CAPN1-226ENST00000533820 LRRC3CA6NJW4 275 aa16.52■□□□□ 0.24
CAPN1-226ENST00000533820 SCAF4O95104 1147 aaKnown RBP16.52■□□□□ 0.24
CAPN1-226ENST00000533820 SRP19P09132 144 aaKnown RBP16.52■□□□□ 0.24
CAPN1-226ENST00000533820 LMO1P25800 156 aa16.52■□□□□ 0.24
CAPN1-226ENST00000533820 FGF8P55075 233 aaPredicted RBP16.52■□□□□ 0.24
CAPN1-226ENST00000533820 PCBD1P61457 104 aa16.52■□□□□ 0.24
CAPN1-226ENST00000533820 MAFAQ8NHW3 353 aaPredicted RBP16.52■□□□□ 0.24
CAPN1-226ENST00000533820 SPIN2AQ99865 258 aa16.52■□□□□ 0.24
CAPN1-226ENST00000533820 SPIN2BQ9BPZ2 258 aa16.52■□□□□ 0.24
CAPN1-226ENST00000533820 ELOVL1Q9BW60 279 aa16.52■□□□□ 0.24
CAPN1-226ENST00000533820 ZNF552Q9H707 407 aaPredicted RBP16.52■□□□□ 0.24
CAPN1-226ENST00000533820 ZNF503-AS2A6NEH8 195 aa16.52■□□□□ 0.23
CAPN1-226ENST00000533820 LILRA1O75019 489 aa16.52■□□□□ 0.23
CAPN1-226ENST00000533820 IAPPP10997 89 aa16.52■□□□□ 0.23
CAPN1-226ENST00000533820 MDKP21741 143 aaPredicted RBP16.52■□□□□ 0.23
CAPN1-226ENST00000533820 ERVFRD-1P60508 538 aa16.52■□□□□ 0.23
CAPN1-226ENST00000533820 LCN15Q6UWW0 184 aa16.52■□□□□ 0.23
CAPN1-226ENST00000533820 SIGLEC12Q96PQ1 595 aa16.52■□□□□ 0.23
CAPN1-226ENST00000533820 C11orf1Q9H5F2 150 aa16.52■□□□□ 0.23
CAPN1-226ENST00000533820 SIAH2O43255 324 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 RPLP1P05386 114 aaKnown RBP16.51■□□□□ 0.23
CAPN1-226ENST00000533820 CD81P60033 236 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 ICAM4Q14773 271 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 MPV17LQ2QL34 196 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 BTNL3Q6UXE8 466 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 FRZBQ92765 325 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 MUCL1Q96DR8 90 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 IL36GQ9NZH8 169 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 DCAF10Q5QP82 559 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 TMEM56Q96MV1 263 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 TMEM56-RWDD3S4R434 201 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 CHD3Q12873 2000 aaKnown RBP16.51■□□□□ 0.23
CAPN1-226ENST00000533820 TRAPPC2LH3BP13 241 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 RAB11AP62491 216 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 JOSD1Q15040 202 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-226ENST00000533820 HIKESHIQ53FT3 197 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 SGCZQ96LD1 299 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 HES7Q9BYE0 225 aa16.51■□□□□ 0.23
CAPN1-226ENST00000533820 ERRFI1Q9UJM3 462 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-226ENST00000533820 GTF3C1Q12789 2109 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 OR4A8P0C604 315 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 SRPXP78539 464 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 PRR14LQ5THK1 2151 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 PSG2P11465 335 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 VDAC1P21796 283 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 C3AR1Q16581 482 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 LPAL2Q16609 132 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 NMSQ5H8A3 153 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 SPATA46Q5T0L3 261 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 TUSC5Q8IXB3 177 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 VSIRQ9H7M9 311 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 TAAR3PQ9P1P4 343 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 DSPP15924 2871 aaKnown RBP16.5■□□□□ 0.23
CAPN1-226ENST00000533820 MED12LQ86YW9 2145 aa16.5■□□□□ 0.23
CAPN1-226ENST00000533820 ELOA3CA0A087WX78 387 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-226ENST00000533820 PGLYRP1O75594 196 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-226ENST00000533820 OR3A1P47881 315 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 RAB1AP62820 205 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 PLPPR1Q8TBJ4 325 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 ABHD5Q8WTS1 349 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 KIAA1456Q9P272 454 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 RBM7Q9Y580 266 aaKnown RBP16.49■□□□□ 0.23
CAPN1-226ENST00000533820 FAM166BA8MTA8 275 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 SERPINE2P07093 398 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 ZNF705AQ6ZN79 300 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-226ENST00000533820 OR1K1Q8NGR3 316 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 KCNE4Q8WWG9 221 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 NIPSNAP3BQ9BS92 247 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 C1QTNF5Q9BXJ0 243 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 METTL15P1P0C7V9 234 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 SELEP16581 610 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 PAX9P55771 341 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 DNLZQ5SXM8 178 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 MKXQ8IYA7 352 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 ZDHHC23Q8IYP9 409 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 ADGRG7Q96K78 797 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 PPP1R3CQ9UQK1 317 aa16.49■□□□□ 0.23
CAPN1-226ENST00000533820 NAPSAO96009 420 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 ID3Q02535 119 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 OR5I1Q13606 314 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 Q6ZRM9 215 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 PPP1R32Q7Z5V6 425 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 GPR146Q96CH1 333 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 ZNF665Q9H7R5 613 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 PLSCR2Q9NRY7 297 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms