RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SETD6Q8TBK2 473 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 RTN4IP1Q8WWV3 396 aaPredicted RBP8.28□□□□□ -1.08
CAPN1-225ENST00000533704 PHYHIPQ92561 330 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 RBMXL1Q96E39 390 aaKnown RBP8.28□□□□□ -1.08
CAPN1-225ENST00000533704 EAF1Q96JC9 268 aaPredicted RBP8.28□□□□□ -1.08
CAPN1-225ENST00000533704 SULT4A1Q9BR01 284 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 TMEM59Q9BXS4 323 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 VCX3BQ9H321 246 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 PLGRKTQ9HBL7 147 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 CHMP1AQ9HD42 196 aaPredicted RBP8.28□□□□□ -1.08
CAPN1-225ENST00000533704 OR2S2Q9NQN1 319 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 GHRLQ9UBU3 117 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 NUDT19A8MXV4 375 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 ZNF736B4DX44 427 aaPredicted RBP8.27□□□□□ -1.09
CAPN1-225ENST00000533704 FGF16O43320 207 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 SC5DO75845 299 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 GLAP06280 429 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 IGLL1P15814 213 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 PPP1CCP36873 323 aaKnown RBP8.27□□□□□ -1.09
CAPN1-225ENST00000533704 MAP2K4P45985 399 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 RPS27AP62979 156 aaKnown RBP8.27□□□□□ -1.09
CAPN1-225ENST00000533704 CT45A1Q5HYN5 189 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 IZUMO2Q6UXV1 221 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 SLC25A48Q6ZT89 311 aaKnown RBP8.27□□□□□ -1.09
CAPN1-225ENST00000533704 C6orf201Q7Z4U5 140 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 IZUMO1Q8IYV9 350 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 C8orf31Q8N9H6 132 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 ZNF439Q8NDP4 499 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 CT45A3Q8NHU0 189 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 KCNG3Q8TAE7 436 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 MRPL30Q8TCC3 161 aaKnown RBP8.27□□□□□ -1.09
CAPN1-225ENST00000533704 CNBD2Q96M20 576 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 NICN1Q9BSH3 213 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 FAAP24Q9BTP7 215 aa8.27□□□□□ -1.09
CAPN1-225ENST00000533704 MOSP00540 346 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 UCHL1P09936 223 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 CHATP28329 748 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 BLVRBP30043 206 aaPredicted RBP8.26□□□□□ -1.09
CAPN1-225ENST00000533704 ZNF134P52741 427 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 SLC35B1P78383 322 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 UNC119Q13432 240 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 TMEM30BQ3MIR4 351 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 Q3ZCU0 254 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 C1orf100Q5SVJ3 147 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 FOXRED2Q8IWF2 684 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 GAPTQ8N292 157 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 OR6M1Q8NGM8 313 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 CHPT1Q8WUD6 406 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 IL1F10Q8WWZ1 152 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 ST6GALNAC6Q969X2 333 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 PHF21AQ96BD5 680 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 ABHD14AQ9BUJ0 271 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 ANKRD60Q9BZ19 345 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 DUSP21Q9H596 190 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 ABRACLQ9P1F3 81 aa8.26□□□□□ -1.09
CAPN1-225ENST00000533704 AK6Q9Y3D8 172 aaKnown RBP8.26□□□□□ -1.09
CAPN1-225ENST00000533704 LINC01548A6NM66 108 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 SLC22A1O15245 554 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 TXNL1O43396 289 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 RGS11O94810 467 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 BPNT1O95861 308 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 IGHG2P01859 326 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 CRHBPP24387 322 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 CD1BP29016 333 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 GPR12P47775 334 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 MLLT11Q13015 90 aaPredicted RBP8.25□□□□□ -1.09
CAPN1-225ENST00000533704 TPBGQ13641 420 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 EBI3Q14213 229 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 RAB11BQ15907 218 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 MORN2Q502X0 79 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 KPRPQ5T749 579 aaPredicted RBP8.25□□□□□ -1.09
CAPN1-225ENST00000533704 TMEM91Q6ZNR0 172 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 Q8N6K4 173 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 GALMQ96C23 342 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 S1PR3Q99500 378 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 MGLLQ99685 303 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 RASL11BQ9BPW5 248 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 URM1Q9BTM9 101 aaKnown RBP8.25□□□□□ -1.09
CAPN1-225ENST00000533704 MRPL20Q9BYC9 149 aaKnown RBP8.25□□□□□ -1.09
CAPN1-225ENST00000533704 MBNL3Q9NUK0 354 aaKnown RBP8.25□□□□□ -1.09
CAPN1-225ENST00000533704 PLEKHJ1Q9NW61 149 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 JPT1Q9UK76 154 aa8.25□□□□□ -1.09
CAPN1-225ENST00000533704 A0A0A6YYD4 124 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 TMEM14DPA8MWL7 114 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 SOCS1O15524 211 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 ARL6IP5O75915 188 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 SLC2A2P11168 524 aaPredicted RBP8.24□□□□□ -1.09
CAPN1-225ENST00000533704 ARSBP15848 533 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 CPEP16870 476 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 OR3A3P47888 321 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 HSPA13P48723 471 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 F2RL1P55085 397 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 CLDN12P56749 244 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 RPL23AP62750 156 aaKnown RBP8.24□□□□□ -1.09
CAPN1-225ENST00000533704 QRFPP83859 136 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 FABP5Q01469 135 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 LSAMPQ13449 338 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 TRAM1Q15629 374 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 C18orf65Q6ZTR6 163 aa8.24□□□□□ -1.09
CAPN1-225ENST00000533704 C8orf86Q6ZUL3 223 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms