RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 HES3Q5TGS1 186 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 C10orf113Q5VZT2 155 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 SPINK14Q6IE38 97 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 DHRS11Q6UWP2 260 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 TGIF2LYQ8IUE0 185 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 C5orf17Q8NAS9 161 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 ADAD2Q8NCV1 583 aaKnown RBP6.12□□□□□ -1.43
CTNND1-236ENST00000533667 FLYWCH2Q96CP2 140 aaKnown RBP6.12□□□□□ -1.43
CTNND1-236ENST00000533667 LRRC3BQ96PB8 259 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 WNT5BQ9H1J7 359 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 MS4A5Q9H3V2 200 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 KLK13Q9UKR3 277 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 CLDN16Q9Y5I7 305 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 GNG7O60262 68 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 ATP6V0CP27449 155 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 CAMPP49913 170 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 SOX8P57073 446 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 ZXDAP98168 799 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 UBE2V2Q15819 145 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 PLPPR5Q32ZL2 321 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 C1orf100Q5SVJ3 147 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 CLEC2AQ6UVW9 174 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 C12orf54Q6X4T0 127 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 MRPL52Q86TS9 123 aaKnown RBP6.12□□□□□ -1.43
CTNND1-236ENST00000533667 ZNF519Q8TB69 540 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 MRPL30Q8TCC3 161 aaKnown RBP6.12□□□□□ -1.43
CTNND1-236ENST00000533667 Q8WTZ3 238 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 DIRC2Q96SL1 478 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 UQCR10Q9UDW1 63 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 NPTNQ9Y639 398 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 F5P12259 2224 aa6.12□□□□□ -1.43
CTNND1-236ENST00000533667 IGHV5-10-1A0A0J9YXX1 117 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 H0Y980 276 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 HRKO00198 91 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 RAB29O14966 203 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 SPINK4O60575 86 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 HPRT1P00492 218 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 FCGR3AP08637 254 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 CCL3P10147 92 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 NUTF2P61970 127 aaKnown RBP6.11□□□□□ -1.43
CTNND1-236ENST00000533667 FDX2Q6P4F2 183 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 TMEM116Q8NCL8 245 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 OR10W1Q8NGF6 305 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 OR1L6Q8NGR2 347 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 OR5R1Q8NH85 324 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 MRGPRFQ96AM1 343 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 MARS2Q96GW9 593 aaKnown RBP6.11□□□□□ -1.43
CTNND1-236ENST00000533667 RASL11BQ9BPW5 248 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 LPAR5Q9H1C0 372 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 RCC2Q9P258 522 aaKnown RBP6.11□□□□□ -1.43
CTNND1-236ENST00000533667 COL24A1Q17RW2 1714 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 DHRS7CA6NNS2 312 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 F5H697 171 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 BMPR1BO00238 502 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 DLEU1O43261 78 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 SRSF10O75494 262 aaKnown RBP6.11□□□□□ -1.43
CTNND1-236ENST00000533667 MT-ND6P03923 174 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 BCL2P10415 239 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 COX7A1P24310 79 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 COL8A1P27658 744 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 NANOS3P60323 173 aaKnown RBP6.11□□□□□ -1.43
CTNND1-236ENST00000533667 ARF6P62330 175 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 PAFAH1B2P68402 229 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 SPINK9Q5DT21 86 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 OR2V2Q96R30 315 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 SAP30LQ9HAJ7 183 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 CXorf65A6NEN9 183 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 SPINT1O43278 529 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 PAGE4O60829 102 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 SRP14P37108 136 aaKnown RBP6.11□□□□□ -1.43
CTNND1-236ENST00000533667 MAGEA5P43359 124 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 EFNB2P52799 333 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 EMP1P54849 157 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 FOXC1Q12948 553 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 CEACAM21Q3KPI0 293 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 CDC42EP3Q9UKI2 254 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 MRPS18BQ9Y676 258 aaKnown RBP6.11□□□□□ -1.43
CTNND1-236ENST00000533667 TMPRSS2O15393 492 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 HLA-DQB1P01920 261 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 FAM157CP0CG43 387 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 ZFP36L2P47974 494 aaKnown RBP6.11□□□□□ -1.43
CTNND1-236ENST00000533667 FGF12P61328 243 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 PIGYQ3MUY2 71 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 TMEM255AQ5JRV8 349 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.11□□□□□ -1.43
CTNND1-236ENST00000533667 CCDC144NLQ6NUI1 221 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 MOGAT3Q86VF5 341 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 APOBEC4Q8WW27 367 aaKnown RBP6.11□□□□□ -1.43
CTNND1-236ENST00000533667 NRIP2Q9BQI9 281 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 TINAGQ9UJW2 476 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 PILRAQ9UKJ1 303 aa6.11□□□□□ -1.43
CTNND1-236ENST00000533667 MED19A0JLT2 244 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-236ENST00000533667 CORTO00230 105 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 MOSPD3O75425 235 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 EML2O95834 649 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 PRSS1P07477 247 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 PPOXP50336 477 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 RPS4XP62701 263 aaKnown RBP6.1□□□□□ -1.43
CTNND1-236ENST00000533667 IFITM3Q01628 133 aa6.1□□□□□ -1.43
CTNND1-236ENST00000533667 SPEM2Q0P670 501 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms