RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 OCSTAMPQ9BR26 566 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 CENPOQ9BU64 300 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 PECRQ9BY49 303 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 VCX3AQ9NNX9 186 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 RNF114Q9Y508 228 aa16.41■□□□□ 0.22
CCS-208ENST00000533244 DIAPH2-AS1Q14236 149 aa16.4■□□□□ 0.22
CCS-208ENST00000533244 SLC25A48Q6ZT89 311 aaKnown RBP16.4■□□□□ 0.22
CCS-208ENST00000533244 MOB1BQ7L9L4 216 aa16.4■□□□□ 0.22
CCS-208ENST00000533244 C5orf24Q7Z6I8 188 aa16.4■□□□□ 0.22
CCS-208ENST00000533244 OR4C13Q8NGP0 309 aa16.4■□□□□ 0.22
CCS-208ENST00000533244 OR10X1Q8NGY0 326 aa16.4■□□□□ 0.22
CCS-208ENST00000533244 ST6GALNAC6Q969X2 333 aa16.4■□□□□ 0.22
CCS-208ENST00000533244 NPFFR1Q9GZQ6 430 aa16.4■□□□□ 0.22
CCS-208ENST00000533244 GNG12Q9UBI6 72 aa16.4■□□□□ 0.22
CCS-208ENST00000533244 JPT1Q9UK76 154 aa16.4■□□□□ 0.22
CCS-208ENST00000533244 LOC100506127A0A0U1RQW1 187 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 FAM90A9PA6NNJ1 464 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 RAB27BO00194 218 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 SLC31A2O15432 143 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 MNDAP41218 407 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 RAB7AP51149 207 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 ZNF137PP52743 207 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 ZNF816Q0VGE8 651 aaPredicted RBP16.39■□□□□ 0.21
CCS-208ENST00000533244 MOGAT2Q3SYC2 334 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 FBLN7Q53RD9 439 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 LY6G6FQ5SQ64 297 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 SFXN4Q6P4A7 337 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 OR8H3Q8N146 312 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 CFHR4Q92496 578 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 HDHD3Q9BSH5 251 aaPredicted RBP16.39■□□□□ 0.21
CCS-208ENST00000533244 C12orf4Q9NQ89 552 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 KCNK7Q9Y2U2 307 aa16.39■□□□□ 0.21
CCS-208ENST00000533244 CD24P25063 80 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 ZNF134P52741 427 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 HABP2Q14520 560 aaPredicted RBP16.38■□□□□ 0.21
CCS-208ENST00000533244 TIMM50Q3ZCQ8 353 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 MORN2Q502X0 79 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 CT45A1Q5HYN5 189 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 STEAP3Q658P3 488 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 C16orf82Q7Z2V1 217 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 Q8N2B8 174 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 OR10V1Q8NGI7 309 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 OR10R2Q8NGX6 335 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 CT45A3Q8NHU0 189 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 ZNF702PQ9H963 129 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 CHMP1AQ9HD42 196 aaPredicted RBP16.38■□□□□ 0.21
CCS-208ENST00000533244 OR2S2Q9NQN1 319 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 FBN3Q75N90 2809 aa16.38■□□□□ 0.21
CCS-208ENST00000533244 HSD17B6O14756 317 aa16.37■□□□□ 0.21
CCS-208ENST00000533244 TIMM23O14925 209 aa16.37■□□□□ 0.21
CCS-208ENST00000533244 CLEC2LP0C7M8 214 aa16.37■□□□□ 0.21
CCS-208ENST00000533244 KRTAP10-3P60369 221 aa16.37■□□□□ 0.21
CCS-208ENST00000533244 GNMTQ14749 295 aa16.37■□□□□ 0.21
CCS-208ENST00000533244 THNSL2Q86YJ6 484 aa16.37■□□□□ 0.21
CCS-208ENST00000533244 OR52L2PQ8NGH6 319 aa16.37■□□□□ 0.21
CCS-208ENST00000533244 GALMQ96C23 342 aa16.37■□□□□ 0.21
CCS-208ENST00000533244 RAB3CQ96E17 227 aa16.37■□□□□ 0.21
CCS-208ENST00000533244 DAPK2Q9UIK4 370 aa16.37■□□□□ 0.21
CCS-208ENST00000533244 MFNGO00587 321 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 YPEL1O60688 119 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 SMIM18P0DKX4 95 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 MXD1Q05195 221 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 DTX3Q8N9I9 347 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 YPEL2Q96QA6 119 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 CITED1Q99966 193 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 CMSS1Q9BQ75 279 aaKnown RBP16.36■□□□□ 0.21
CCS-208ENST00000533244 Q9N2K0 584 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 MGAT4AQ9UM21 535 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 METTL21EPA6NDL7 271 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 OR2F2O95006 317 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 GAPDHP04406 335 aaKnown RBP16.36■□□□□ 0.21
CCS-208ENST00000533244 HIST1H1DP16402 221 aaKnown RBP16.36■□□□□ 0.21
CCS-208ENST00000533244 IL3RAP26951 378 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 PPP1CCP36873 323 aaKnown RBP16.36■□□□□ 0.21
CCS-208ENST00000533244 HLA-DRB3P79483 266 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 C11orf88Q6PI97 169 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 DRAM1Q8N682 238 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 OR56B4Q8NH76 319 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 RBM14Q96PK6 669 aaKnown RBP16.36■□□□□ 0.21
CCS-208ENST00000533244 ABRACLQ9P1F3 81 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 SIGLEC9Q9Y336 463 aa16.36■□□□□ 0.21
CCS-208ENST00000533244 IGHV1-3A0A0C4DH29 117 aa16.35■□□□□ 0.21
CCS-208ENST00000533244 AIREO43918 545 aa16.35■□□□□ 0.21
CCS-208ENST00000533244 SNRPBP14678 240 aaKnown RBP16.35■□□□□ 0.21
CCS-208ENST00000533244 SCAND1P57086 179 aa16.35■□□□□ 0.21
CCS-208ENST00000533244 SRSF4Q08170 494 aaKnown RBP16.35■□□□□ 0.21
CCS-208ENST00000533244 OR2T6Q8NHC8 308 aa16.35■□□□□ 0.21
CCS-208ENST00000533244 SETD6Q8TBK2 473 aa16.35■□□□□ 0.21
CCS-208ENST00000533244 LGALS14Q8TCE9 139 aa16.35■□□□□ 0.21
CCS-208ENST00000533244 RTN4IP1Q8WWV3 396 aaPredicted RBP16.35■□□□□ 0.21
CCS-208ENST00000533244 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCS-208ENST00000533244 RGS11O94810 467 aa16.34■□□□□ 0.21
CCS-208ENST00000533244 SNRNP70P08621 437 aaKnown RBP16.34■□□□□ 0.21
CCS-208ENST00000533244 FAM106CPP0CH98 169 aa16.34■□□□□ 0.21
CCS-208ENST00000533244 SGMS2Q8NHU3 365 aa16.34■□□□□ 0.21
CCS-208ENST00000533244 CAPSLQ8WWF8 208 aa16.34■□□□□ 0.21
CCS-208ENST00000533244 AKR1E2Q96JD6 320 aa16.34■□□□□ 0.21
CCS-208ENST00000533244 SLC25A33Q9BSK2 321 aa16.34■□□□□ 0.21
CCS-208ENST00000533244 ABHD14AQ9BUJ0 271 aa16.34■□□□□ 0.21
CCS-208ENST00000533244 PRSS22Q9GZN4 317 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms