RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 GABRA2P47869 451 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 DEFA1P59665 94 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 DEFA3P59666 94 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 MRPS15P82914 257 aaKnown RBP9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 SSBP1Q04837 148 aaKnown RBP9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 ASAH1Q13510 395 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 KLF9Q13886 244 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 RBM39Q14498 530 aaKnown RBP9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 NSUN5P1Q3KNT7 163 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 PAN3Q58A45 887 aaKnown RBP9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 KLHDC1Q8N7A1 406 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 GVQW1Q8N7I0 195 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 OR2T6Q8NHC8 308 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 NEK7Q8TDX7 302 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 HDHD3Q9BSH5 251 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 ST6GALNAC5Q9BVH7 336 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 C11orf54Q9H0W9 315 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 SIRPDQ9H106 197 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 MMP28Q9H239 520 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNRD1Q9P1U0 126 aa9.19□□□□□ -0.94
TRAPPC4-213ENST00000533149 TMEM82A0PJX8 343 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 OOEPA6NGQ2 149 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 HSPB6O14558 160 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 ECDO95905 644 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 MUC1P15941 1255 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 AMY2BP19961 511 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 CD33P20138 364 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 RCVRNP35243 200 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 AP3S2P59780 193 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 ACTBP60709 375 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 DYRK1AQ13627 763 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 MICBQ29980 383 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 RGS21Q2M5E4 152 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 TEX36Q5VZQ5 186 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 LYPD2Q6UXB3 125 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 C1orf122Q6ZSJ8 110 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 GDPD3Q7L5L3 318 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 HOGA1Q86XE5 327 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 NDUFA11Q86Y39 141 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 LYG1Q8N1E2 194 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 TMEM229BQ8NBD8 167 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 WFDC9Q8NEX5 89 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 OR4C13Q8NGP0 309 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 ANGPTL6Q8NI99 470 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 SETD6Q8TBK2 473 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 IFT46Q9NQC8 304 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 ETAA1Q9NY74 926 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 TAS2R8Q9NYW2 309 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNF230Q9UIE0 474 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNF222Q9UK12 451 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 SIGLEC9Q9Y336 463 aa9.18□□□□□ -0.94
TRAPPC4-213ENST00000533149 COL7A1Q02388 2944 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 TRAV38-1A0A0B4J264 116 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 PSPNO60542 156 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 GYPAP02724 150 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 NHLRC4P0CG21 123 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 IGLL1P15814 213 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 NAT1P18440 290 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 HLA-DMAP28067 261 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 KCNJ8Q15842 424 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 MZT2BQ6NZ67 158 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 PLPPR1Q8TBJ4 325 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 MAFIPQ8WZ33 124 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 CCL13Q99616 98 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 CHST6Q9GZX3 395 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 CHMP1AQ9HD42 196 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 HRASLSQ9HDD0 168 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNF107Q9UII5 783 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 ANAPC10Q9UM13 185 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 U3KQK5 164 aa9.17□□□□□ -0.94
TRAPPC4-213ENST00000533149 WI2-2373I1.2A0A1W2PRP0 233 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 CENPXA8MT69 81 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNF736B4DX44 427 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 LYRM1O43325 122 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 FBXO24O75426 580 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 NAPSAO96009 420 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 MT-ND4P03905 459 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 CD3DP04234 171 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 FCGR3AP08637 254 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 AKAIN1P0CW23 69 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 VSIG10L2P0DP72 767 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 DTYMKP23919 212 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 OR3A1P47881 315 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 RFX2P48378 723 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 TAS2R19P59542 299 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 ARF6P62330 175 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 C11orf91Q3C1V1 193 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 ATPAF1Q5TC12 328 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 STUMQ69YW2 141 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 OR52W1Q6IF63 320 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 STEAP1BQ6NZ63 245 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 PDZD9Q8IXQ8 264 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 ASCC1Q8N9N2 400 aaKnown RBP9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 PPP1R35Q8TAP8 253 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 SDSLQ96GA7 329 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 SNX22Q96L94 193 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 C7orf50Q9BRJ6 194 aaKnown RBP9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 RIMS4Q9H426 269 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 RANBP3Q9H6Z4 567 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 ING3Q9NXR8 418 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms