RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ACOT13Q9NPJ3 140 aa24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 SLC17A2O00624 439 aa24.1■■□□□ 1.45
SSSCA1-207ENST00000533115 SLC31A2O15432 143 aa24.1■■□□□ 1.45
SSSCA1-207ENST00000533115 KCNAB3O43448 404 aa24.1■■□□□ 1.45
SSSCA1-207ENST00000533115 IGKV1D-33P01593 117 aa24.1■■□□□ 1.45
SSSCA1-207ENST00000533115 IGKV1-33P01594 117 aa24.1■■□□□ 1.45
SSSCA1-207ENST00000533115 CALRP27797 417 aaKnown RBP24.1■■□□□ 1.45
SSSCA1-207ENST00000533115 C9orf152Q5JTZ5 239 aa24.1■■□□□ 1.45
SSSCA1-207ENST00000533115 C6orf201Q7Z4U5 140 aa24.1■■□□□ 1.45
SSSCA1-207ENST00000533115 NDUFA11Q86Y39 141 aa24.1■■□□□ 1.45
SSSCA1-207ENST00000533115 OR5AU1Q8NGC0 362 aa24.1■■□□□ 1.45
SSSCA1-207ENST00000533115 FAAP24Q9BTP7 215 aa24.1■■□□□ 1.45
SSSCA1-207ENST00000533115 ARSBP15848 533 aa24.09■■□□□ 1.45
SSSCA1-207ENST00000533115 ZNF134P52741 427 aa24.09■■□□□ 1.45
SSSCA1-207ENST00000533115 EMX1Q04741 257 aaPredicted RBP24.09■■□□□ 1.45
SSSCA1-207ENST00000533115 HNF4GQ14541 408 aa24.09■■□□□ 1.45
SSSCA1-207ENST00000533115 P2RY14Q15391 338 aa24.09■■□□□ 1.45
SSSCA1-207ENST00000533115 CT45A1Q5HYN5 189 aa24.09■■□□□ 1.45
SSSCA1-207ENST00000533115 CENPVQ7Z7K6 275 aaPredicted RBP24.09■■□□□ 1.45
SSSCA1-207ENST00000533115 CT45A3Q8NHU0 189 aa24.09■■□□□ 1.45
SSSCA1-207ENST00000533115 RTN4IP1Q8WWV3 396 aaPredicted RBP24.09■■□□□ 1.45
SSSCA1-207ENST00000533115 OR2S2Q9NQN1 319 aa24.09■■□□□ 1.45
SSSCA1-207ENST00000533115 EBI3Q14213 229 aa24.08■■□□□ 1.45
SSSCA1-207ENST00000533115 OR2W3Q7Z3T1 314 aa24.08■■□□□ 1.45
SSSCA1-207ENST00000533115 A0A0A6YYD4 124 aa24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 OPN1MWP04001 364 aa24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 OPN1MW2P0DN77 364 aa24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 OPN1MW3P0DN78 364 aa24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 BLVRBP30043 206 aaPredicted RBP24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 GABARAPL2P60520 117 aa24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 RAB11BQ15907 218 aa24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 SSX1Q16384 188 aa24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 C5orf24Q7Z6I8 188 aa24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 C5orf56Q8N8D9 126 aa24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 URM1Q9BTM9 101 aaKnown RBP24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 LPAR5Q9H1C0 372 aa24.07■■□□□ 1.44
SSSCA1-207ENST00000533115 IGHV3-72A0A0B4J1Y9 119 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 ADARB2-AS1A8MUL3 147 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 FGF16O43320 207 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 ZNF137PP52743 207 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 HTD2P86397 168 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 MORN2Q502X0 79 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 STEAP3Q658P3 488 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 IZUMO1Q8IYV9 350 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 OR52L2PQ8NGH6 319 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 PLEKHJ1Q9NW61 149 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 JPT1Q9UK76 154 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 LRRC42Q9Y546 428 aa24.06■■□□□ 1.44
SSSCA1-207ENST00000533115 MRPS14O60783 128 aaKnown RBP24.05■■□□□ 1.44
SSSCA1-207ENST00000533115 CD83Q01151 205 aa24.05■■□□□ 1.44
SSSCA1-207ENST00000533115 EAF1Q96JC9 268 aaPredicted RBP24.05■■□□□ 1.44
SSSCA1-207ENST00000533115 Q9H521 79 aa24.05■■□□□ 1.44
SSSCA1-207ENST00000533115 V9GY05 133 aa24.05■■□□□ 1.44
SSSCA1-207ENST00000533115 TXNL1O43396 289 aa24.04■■□□□ 1.44
SSSCA1-207ENST00000533115 CD1BP29016 333 aa24.04■■□□□ 1.44
SSSCA1-207ENST00000533115 PSMD7P51665 324 aa24.04■■□□□ 1.44
SSSCA1-207ENST00000533115 GNMTQ14749 295 aa24.04■■□□□ 1.44
SSSCA1-207ENST00000533115 HMGN3Q15651 99 aa24.04■■□□□ 1.44
SSSCA1-207ENST00000533115 TGIF2LXQ8IUE1 241 aa24.04■■□□□ 1.44
SSSCA1-207ENST00000533115 FAM89BQ8N5H3 189 aa24.04■■□□□ 1.44
SSSCA1-207ENST00000533115 OR51D1Q8NGF3 324 aa24.04■■□□□ 1.44
SSSCA1-207ENST00000533115 OR2T10Q8NGZ9 312 aa24.04■■□□□ 1.44
SSSCA1-207ENST00000533115 GALMQ96C23 342 aa24.04■■□□□ 1.44
SSSCA1-207ENST00000533115 NDUFB11Q9NX14 153 aa24.04■■□□□ 1.44
SSSCA1-207ENST00000533115 SOCS1O15524 211 aa24.03■■□□□ 1.44
SSSCA1-207ENST00000533115 DENRO43583 198 aaKnown RBP24.03■■□□□ 1.44
SSSCA1-207ENST00000533115 NAPSAO96009 420 aa24.03■■□□□ 1.44
SSSCA1-207ENST00000533115 RANBP1P43487 201 aa24.03■■□□□ 1.44
SSSCA1-207ENST00000533115 CLDN12P56749 244 aa24.03■■□□□ 1.44
SSSCA1-207ENST00000533115 OR4F17Q8NGA8 305 aa24.03■■□□□ 1.44
SSSCA1-207ENST00000533115 R3HDM4Q96D70 268 aa24.03■■□□□ 1.44
SSSCA1-207ENST00000533115 OR4F4Q96R69 305 aa24.03■■□□□ 1.44
SSSCA1-207ENST00000533115 CHMP1AQ9HD42 196 aaPredicted RBP24.03■■□□□ 1.44
SSSCA1-207ENST00000533115 PPP1CCP36873 323 aaKnown RBP24.02■■□□□ 1.44
SSSCA1-207ENST00000533115 TCTEX1D4Q5JR98 221 aa24.02■■□□□ 1.44
SSSCA1-207ENST00000533115 SVOPQ8N4V2 548 aa24.02■■□□□ 1.44
SSSCA1-207ENST00000533115 Q8N6K4 173 aa24.02■■□□□ 1.44
SSSCA1-207ENST00000533115 FAM3DQ96BQ1 224 aa24.02■■□□□ 1.44
SSSCA1-207ENST00000533115 ABHD14AQ9BUJ0 271 aa24.02■■□□□ 1.44
SSSCA1-207ENST00000533115 ABRACLQ9P1F3 81 aa24.02■■□□□ 1.44
SSSCA1-207ENST00000533115 YPEL1O60688 119 aa24.01■■□□□ 1.43
SSSCA1-207ENST00000533115 RGS11O94810 467 aa24.01■■□□□ 1.43
SSSCA1-207ENST00000533115 C2orf76Q3KRA6 126 aa24.01■■□□□ 1.43
SSSCA1-207ENST00000533115 LY6G6FQ5SQ64 297 aa24.01■■□□□ 1.43
SSSCA1-207ENST00000533115 ZNF880Q6PDB4 577 aa24.01■■□□□ 1.43
SSSCA1-207ENST00000533115 CD200R1LQ6Q8B3 271 aa24.01■■□□□ 1.43
SSSCA1-207ENST00000533115 OR4X2Q8NGF9 303 aa24.01■■□□□ 1.43
SSSCA1-207ENST00000533115 YPEL2Q96QA6 119 aa24.01■■□□□ 1.43
SSSCA1-207ENST00000533115 RIMS4Q9H426 269 aaPredicted RBP24.01■■□□□ 1.43
SSSCA1-207ENST00000533115 TRAV1-2A0A0B4J238 106 aa24■■□□□ 1.43
SSSCA1-207ENST00000533115 FOXI3A8MTJ6 420 aaPredicted RBP24■■□□□ 1.43
SSSCA1-207ENST00000533115 ZNF736B4DX44 427 aaPredicted RBP24■■□□□ 1.43
SSSCA1-207ENST00000533115 PDCD5O14737 125 aa24■■□□□ 1.43
SSSCA1-207ENST00000533115 LANCL1O43813 399 aa24■■□□□ 1.43
SSSCA1-207ENST00000533115 MOSP00540 346 aa24■■□□□ 1.43
SSSCA1-207ENST00000533115 C10orf99Q6UWK7 81 aa24■■□□□ 1.43
SSSCA1-207ENST00000533115 Q6ZPA2 131 aa24■■□□□ 1.43
SSSCA1-207ENST00000533115 C1QL4Q86Z23 238 aa24■■□□□ 1.43
SSSCA1-207ENST00000533115 STEAP1Q9UHE8 339 aa24■■□□□ 1.43
SSSCA1-207ENST00000533115 AK3Q9UIJ7 227 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms