RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 FUT5Q11128 374 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 NFAM1Q8NET5 270 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-221ENST00000532331 NEURL2Q9BR09 285 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 MMP24Q9Y5R2 645 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 MBPP02686 304 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-221ENST00000532331 HLA-GP17693 338 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 RPS4Y1P22090 263 aaKnown RBP9.76□□□□□ -0.85
PTPRK-221ENST00000532331 DHRS7BQ6IAN0 325 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-221ENST00000532331 SLC25A42Q86VD7 318 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 MARS2Q96GW9 593 aaKnown RBP9.76□□□□□ -0.85
PTPRK-221ENST00000532331 WDYHV1Q96HA8 205 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 ATP5SQ99766 215 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 PARD6AQ9NPB6 346 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 CHST1O43916 411 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 HSBP1O75506 76 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 CD1AP06126 327 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 NQO2P16083 231 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 TMEM91Q6ZNR0 172 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 C1orf162Q8NEQ5 155 aaPredicted RBP9.75□□□□□ -0.85
PTPRK-221ENST00000532331 ZNF426Q9BUY5 554 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 SLC35B3Q9H1N7 401 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 MIXL1Q9H2W2 232 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 SLC2A9Q9NRM0 540 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 TMEM167BQ9NRX6 74 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 TMEM229AB2RXF0 380 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 GLRXP35754 106 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 NBL1P41271 181 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 ARF6P62330 175 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 C11orf91Q3C1V1 193 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 MRPS18CQ9Y3D5 142 aaKnown RBP9.75□□□□□ -0.85
PTPRK-221ENST00000532331 TRAPPC1Q9Y5R8 145 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 PCM1Q15154 2024 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 ZNF826PQ6ZT77 177 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 PTX4Q96A99 478 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 SNX22Q96L94 193 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 TECRQ9NZ01 308 aaKnown RBP9.75□□□□□ -0.85
PTPRK-221ENST00000532331 KLHDC2Q9Y2U9 406 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 CACNA1GO43497 2377 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 ZP3P21754 424 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 UBE2L3P68036 154 aaKnown RBP9.75□□□□□ -0.85
PTPRK-221ENST00000532331 CEBPEQ15744 281 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 GCSAMQ8N6F7 178 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 C9orf106Q8NAJ2 232 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 ZNF418Q8TF45 676 aaPredicted RBP9.75□□□□□ -0.85
PTPRK-221ENST00000532331 PARP11Q9NR21 331 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 CACNA1EQ15878 2313 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 THADAQ6YHU6 1953 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 LEUTXA8MZ59 168 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 GATCO43716 136 aaKnown RBP9.75□□□□□ -0.85
PTPRK-221ENST00000532331 KIR3DL2P43630 455 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 RBM11P57052 281 aaKnown RBP9.75□□□□□ -0.85
PTPRK-221ENST00000532331 TPPP2P59282 170 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 PDPNQ86YL7 162 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 OR10A7Q8NGE5 316 aa9.75□□□□□ -0.85
PTPRK-221ENST00000532331 NOL4LQ96MY1 436 aaPredicted RBP9.75□□□□□ -0.85
PTPRK-221ENST00000532331 A0A1W2PPE3 182 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 ZG16O60844 167 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 LIMS1P48059 325 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 PRR13Q9NZ81 148 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 LCTP09848 1927 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 PTPRFP10586 1907 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 TRAV39A0A0B4J263 110 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 CLDN34H7C241 214 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 LIPFP07098 398 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 GALR1P47211 349 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 SUMO1P63165 101 aaKnown RBP9.74□□□□□ -0.85
PTPRK-221ENST00000532331 LY6EQ16553 131 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 DCTN5Q9BTE1 182 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 CLEC5AQ9NY25 188 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 MGAMO43451 1857 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 SYNGR1O43759 233 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 PF4V1P10720 104 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 HOGA1Q86XE5 327 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 GPX7Q96SL4 187 aaPredicted RBP9.74□□□□□ -0.85
PTPRK-221ENST00000532331 KCNE5Q9UJ90 142 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 LOC102723971A0A1B0GUV8 181 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 RAB29O14966 203 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 TGFAP01135 160 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 PRSS33Q8NF86 280 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 ABHD14AQ9BUJ0 271 aa9.74□□□□□ -0.85
PTPRK-221ENST00000532331 C1QCP02747 245 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 MPV17P39210 176 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 NANOS3P60323 173 aaKnown RBP9.73□□□□□ -0.85
PTPRK-221ENST00000532331 Q9N2K0 584 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 MANBALQ9NQG1 85 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 IGHV3OR16-10A0A075B7F0 116 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 F5H697 171 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 ZIC3O60481 467 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 KLF7O75840 302 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-221ENST00000532331 CDS2O95674 445 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 FGF8P55075 233 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-221ENST00000532331 TPRX1Q8N7U7 411 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 POM121Q96HA1 1249 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 SIRT7Q9NRC8 400 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 NAGKQ9UJ70 344 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 A0A1B0GU03 582 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 PF4P02776 101 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 KRTDAPP60985 99 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 KLF9Q13886 244 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-221ENST00000532331 Q8WTZ3 238 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms