RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 FAM90A16PA6NEW6 464 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 FAM90A20PA6NIJ5 464 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 IFITM5A6NNB3 132 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 FAM90A9PA6NNJ1 464 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 FAM90A12PA8MX19 464 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 FAM90A5PA8MXJ8 464 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 NUDT19A8MXV4 375 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 SH2D1BO14796 132 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 SULT1B1O43704 296 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 CYB5AP00167 134 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 HLA-DQB1P01920 261 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 SNRNP70P08621 437 aaKnown RBP13.67□□□□□ -0.22
PKP3-208ENST00000531857 FAM90A15PP0C7V4 464 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 FAM90A13PP0C7W8 464 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 FAM90A14PP0C7W9 464 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 FAM90A24PP0C7X0 464 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 FAM106CPP0CH98 169 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 FSTP19883 344 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 MYCNOSP40205 109 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 MNDAP41218 407 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 KIR3DL2P43630 455 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 PRRX1P54821 245 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 MRPS10P82664 201 aaKnown RBP13.67□□□□□ -0.22
PKP3-208ENST00000531857 IFITM3Q01628 133 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 ASAH1Q13510 395 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 PYDC2Q56P42 97 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 NKAPLQ5M9Q1 402 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 TRIQKQ629K1 86 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 CCDC144NLQ6NUI1 221 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 MZT2BQ6NZ67 158 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 KLHL30-AS1Q8NEE0 82 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 RFT1Q96AA3 541 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 COQ2Q96H96 371 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 DHDHQ9UQ10 334 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 ODAMA1E959 279 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 OOSP1A8MZH6 123 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 HPGDSO60760 199 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 NHLRC4P0CG21 123 aaPredicted RBP13.66□□□□□ -0.22
PKP3-208ENST00000531857 IL7P13232 177 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 ATF1P18846 271 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 NFYBP25208 207 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 LMO1P25800 156 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 PTGFRP43088 359 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 INPP1P49441 399 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 PDZK1IP1Q13113 114 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 INSL4Q14641 139 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 ZNF79Q15937 498 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 C17orf58Q2M2W7 97 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 UBE2NLQ5JXB2 153 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 C5orf56Q8N8D9 126 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 OR4D6Q8NGJ1 314 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 OR56B4Q8NH76 319 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 TSEN15Q8WW01 171 aaKnown RBP13.66□□□□□ -0.22
PKP3-208ENST00000531857 PP6455Q8WZ26 134 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 C10orf35Q96D05 121 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 PPIL3Q9H2H8 161 aaKnown RBP13.66□□□□□ -0.22
PKP3-208ENST00000531857 ZFP57Q9NU63 452 aa13.66□□□□□ -0.22
PKP3-208ENST00000531857 LSM4Q9Y4Z0 139 aaKnown RBP13.66□□□□□ -0.22
PKP3-208ENST00000531857 STAB2Q8WWQ8 2551 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 A0A1B0GVG6 124 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 FUOMA2VDF0 154 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 SERPINE3A8MV23 424 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 CTDSPLO15194 276 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 IGHV3-7P01780 117 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 SLC2A2P11168 524 aaPredicted RBP13.65□□□□□ -0.22
PKP3-208ENST00000531857 IL18Q14116 193 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 DIAPH2-AS1Q14236 149 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 KRBOX4Q5JUW0 171 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 GLT8D1Q68CQ7 371 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 Q6P435 159 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 THNSL2Q86YJ6 484 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 CDH26Q8IXH8 852 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 Q8N402 240 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 DRAM1Q8N682 238 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 NKAIN3Q8N8D7 197 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 SAMD12Q8N8I0 201 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 DEDD2Q8WXF8 326 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 LEAP2Q969E1 77 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 TOMM40LQ969M1 308 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 TMEM106AQ96A25 262 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 RPEQ96AT9 228 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 RAX2Q96IS3 184 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 SPACA5Q96QH8 159 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 SDHCQ99643 169 aaPredicted RBP13.65□□□□□ -0.22
PKP3-208ENST00000531857 EXTL2Q9UBQ6 330 aa13.65□□□□□ -0.22
PKP3-208ENST00000531857 A0A1W2PPI3 338 aa13.64□□□□□ -0.23
PKP3-208ENST00000531857 LINC01548A6NM66 108 aa13.64□□□□□ -0.23
PKP3-208ENST00000531857 ZNF729A6NN14 1252 aaPredicted RBP13.64□□□□□ -0.23
PKP3-208ENST00000531857 SLC33A1O00400 549 aaPredicted RBP13.64□□□□□ -0.23
PKP3-208ENST00000531857 CD37P11049 281 aa13.64□□□□□ -0.23
PKP3-208ENST00000531857 ZNF44P15621 663 aa13.64□□□□□ -0.23
PKP3-208ENST00000531857 SLC6A1P30531 599 aa13.64□□□□□ -0.23
PKP3-208ENST00000531857 BCAP31P51572 246 aa13.64□□□□□ -0.23
PKP3-208ENST00000531857 LUMP51884 338 aaPredicted RBP13.64□□□□□ -0.23
PKP3-208ENST00000531857 RAB25P57735 213 aa13.64□□□□□ -0.23
PKP3-208ENST00000531857 HES1Q14469 280 aa13.64□□□□□ -0.23
PKP3-208ENST00000531857 HNF4GQ14541 408 aa13.64□□□□□ -0.23
PKP3-208ENST00000531857 ATXN7L3Q14CW9 347 aaPredicted RBP13.64□□□□□ -0.23
PKP3-208ENST00000531857 ZNF695Q8IW36 515 aa13.64□□□□□ -0.23
PKP3-208ENST00000531857 OR5D18Q8NGL1 313 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms