RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 LMO7DNF2Z398 122 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 TGFAP01135 160 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 SRIP30626 198 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 PAX2Q02962 417 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 LDLRAD2Q5SZI1 272 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 TMEM78Q5T7P6 136 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 PTPMT1Q8WUK0 201 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-229ENST00000531014 PLPPR2Q96GM1 343 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 ZNF48Q96MX3 618 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-229ENST00000531014 PLA2G2FQ9BZM2 168 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 HSPB7Q9UBY9 170 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 PCOLCE2Q9UKZ9 415 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 C19orf53Q9UNZ5 99 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-229ENST00000531014 A0A096LPE4 126 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 CXorf51AA0A1B0GTR3 108 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 A0A1W2PPZ6 126 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 PQLC2LA1A4F0 135 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 ERVH48-1M5A8F1 160 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 DHHO43323 396 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 GALP22466 123 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 SSBP2P81877 361 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-229ENST00000531014 EWSR1Q01844 656 aaKnown RBP eCLIP6.37□□□□□ -1.39
CTNND1-229ENST00000531014 FBLN7Q53RD9 439 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 TMEM170BQ5T4T1 132 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 FOXB2Q5VYV0 432 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 TEPPQ6URK8 271 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 Q6ZSR9 355 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 TTC9BQ8N6N2 239 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 BCORP1Q8N888 145 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 ST8SIA1Q92185 356 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 ST6GAL2Q96JF0 529 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 PAXXQ9BUH6 204 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 LAT2Q9GZY6 243 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 PRO3102Q9H379 93 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 hADV38S2A0JD32 116 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 DEFB108AA8MXU0 73 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 C21orf140B9A014 251 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 HOXA5P20719 270 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 FGF9P31371 208 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-229ENST00000531014 RAE1P78406 368 aaKnown RBP6.37□□□□□ -1.39
CTNND1-229ENST00000531014 RPS19BP1Q86WX3 136 aaKnown RBP6.37□□□□□ -1.39
CTNND1-229ENST00000531014 PTOV1Q86YD1 416 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 CYB561D1Q8N8Q1 229 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 OR6X1Q8NH79 312 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 DYNLRB2Q8TF09 96 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 TMEM45BQ96B21 275 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 INSM2Q96T92 566 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-229ENST00000531014 ISG20L2Q9H9L3 353 aaKnown RBP6.37□□□□□ -1.39
CTNND1-229ENST00000531014 TMEM160Q9NX00 188 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 ANKRD10Q9NXR5 420 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 SLC25A15Q9Y619 301 aa6.37□□□□□ -1.39
CTNND1-229ENST00000531014 ALOX12BO75342 701 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 SELENOPP49908 381 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 HIST1H4AP62805 103 aaKnown RBP6.36□□□□□ -1.39
CTNND1-229ENST00000531014 DUSP2Q05923 314 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 SARAFQ96BY9 339 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 ORAI1Q96D31 301 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 ALX4Q9H161 411 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-229ENST00000531014 WDR13Q9H1Z4 485 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 C1RLQ9NZP8 487 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 NTMQ9P121 344 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 A0A1W2PP11 408 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 SS18L1O75177 396 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-229ENST00000531014 PDCD6O75340 191 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 IGF2P01344 180 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 MEF2BQ02080 365 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-229ENST00000531014 IL11RAQ14626 422 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 S100A7L2Q5SY68 101 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 PUSL1Q8N0Z8 303 aaKnown RBP6.36□□□□□ -1.39
CTNND1-229ENST00000531014 RFESDQ8TAC1 157 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 RGP1Q92546 391 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-229ENST00000531014 PDXPQ96GD0 296 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 SLIRPQ9GZT3 109 aaKnown RBP6.36□□□□□ -1.39
CTNND1-229ENST00000531014 ASCL3Q9NQ33 180 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 PRNDQ9UKY0 176 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 TMEM272A0A1B0GTI8 110 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 ANKRD20A5PA0PJZ0 165 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 ZNF729A6NN14 1252 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-229ENST00000531014 LINC00614P0C842 121 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 SNAI3Q3KNW1 292 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 EBLN2Q6P2I7 272 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 ABHD17CQ6PCB6 329 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 GPRIN1Q7Z2K8 1008 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 HIGD1AQ9Y241 93 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 IGKV3-7A0A075B6H7 116 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 TRAV12-3A0A0B4J271 114 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 UPK1AO00322 258 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 NKX2-8O15522 239 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 HSPB1P04792 205 aaKnown RBP6.36□□□□□ -1.39
CTNND1-229ENST00000531014 RPS27P42677 84 aaKnown RBP6.36□□□□□ -1.39
CTNND1-229ENST00000531014 OR3A4PP47883 348 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 TNFSF10P50591 281 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 KCNMB1Q16558 191 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 TMEM52BQ4KMG9 183 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 OTPQ5XKR4 325 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 WDTC1Q8N5D0 677 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 PRR7Q8TB68 274 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 NEU1Q99519 415 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 KLK15Q9H2R5 256 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 SLC6A13Q9NSD5 602 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms