RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ING4Q9UNL4 249 aa6.81□□□□□ -1.32
SSBP3-212ENST00000528930 UBE2J1Q9Y385 318 aaPredicted RBP6.81□□□□□ -1.32
SSBP3-212ENST00000528930 SESN1Q9Y6P5 492 aa6.81□□□□□ -1.32
SSBP3-212ENST00000528930 KIAA2026Q5HYC2 2103 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 A0A1W2PP11 408 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 ODAMA1E959 279 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 H3BUX3 64 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 HTR3BO95264 441 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 ARG1P05089 322 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 LYL1P12980 280 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 CD36P16671 472 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 SOX6P35712 828 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 GDNFP39905 211 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 OR3A3P47888 321 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 LGALS4P56470 323 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 PPP3R1P63098 170 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 INSL4Q14641 139 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 ATXN7L3Q14CW9 347 aaPredicted RBP6.8□□□□□ -1.32
SSBP3-212ENST00000528930 RSU1Q15404 277 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 C17orf58Q2M2W7 97 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 LRRC75BQ2VPJ9 315 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 PIGYQ3MUY2 71 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 NHLRC3Q5JS37 347 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 KRBOX4Q5JUW0 171 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 UNQ9370/PRO34162Q6UXP9 181 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 BAIAP2L2Q6UXY1 529 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 Q6ZSV7 163 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 NDNFQ8TB73 568 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 PLPPR1Q8TBJ4 325 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 ZFAND1Q8TCF1 268 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 MND1Q9BWT6 205 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 METTL9Q9H1A3 318 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 PPIL3Q9H2H8 161 aaKnown RBP6.8□□□□□ -1.32
SSBP3-212ENST00000528930 TMEM133Q9H2Q1 129 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 TAS2R3Q9NYW6 316 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 FOXJ3Q9UPW0 622 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 ST3GAL6Q9Y274 331 aa6.8□□□□□ -1.32
SSBP3-212ENST00000528930 TBL2Q9Y4P3 447 aaKnown RBP6.8□□□□□ -1.32
SSBP3-212ENST00000528930 TRGV10A0A0A0MS01 117 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 IGHV2-26A0A0B4J1V2 119 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 LINC00862A6NCI5 91 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 BTBD17A6NE02 478 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 AIREO43918 545 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 SC5DO75845 299 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 TSPAN9O75954 239 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 MAS1P04201 325 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 IL7P13232 177 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 CTRB1P17538 263 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 SERPINA2P20848 420 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 CDK2P24941 298 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 PAX5Q02548 391 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 ASAH1Q13510 395 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 SPHARQ15513 63 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 LY6EQ16553 131 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 ACSM3Q53FZ2 586 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 PAN3Q58A45 887 aaKnown RBP6.79□□□□□ -1.32
SSBP3-212ENST00000528930 UTF1Q5T230 341 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 PRAMEF5Q5TYX0 476 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 CTRB2Q6GPI1 263 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 HEPN1Q6WQI6 88 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 TRAPPC6BQ86SZ2 158 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 CDH26Q8IXH8 852 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 OSR2Q8N2R0 312 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 MS4A15Q8N5U1 240 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 OR4P4Q8NGL7 312 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 MALSU1Q96EH3 234 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 NCOR1P1Q9H4R4 102 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 C16orf95Q9H693 158 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 IFT22Q9H7X7 185 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 ABCB10Q9NRK6 738 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 ING3Q9NXR8 418 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 CKLFQ9UBR5 152 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 KIF25Q9UIL4 384 aa6.79□□□□□ -1.32
SSBP3-212ENST00000528930 RBMX2Q9Y388 322 aaKnown RBP6.79□□□□□ -1.32
SSBP3-212ENST00000528930 A0A087X0M5 115 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 A0A1B0GX30 115 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 ZNF729A6NN14 1252 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-212ENST00000528930 HSPB6O14558 160 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 GEMIN2O14893 280 aaKnown RBP6.78□□□□□ -1.32
SSBP3-212ENST00000528930 ZNF780AO75290 641 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-212ENST00000528930 IGLV1-47P01700 117 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 CSTBP04080 98 aaKnown RBP6.78□□□□□ -1.32
SSBP3-212ENST00000528930 CD37P11049 281 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 CD34P28906 385 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 KCNJ3P48549 501 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 RAB13P51153 203 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 RBM11P57052 281 aaKnown RBP6.78□□□□□ -1.32
SSBP3-212ENST00000528930 VBP1P61758 197 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 CTAG1AP78358 180 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 MRPS15P82914 257 aaKnown RBP6.78□□□□□ -1.32
SSBP3-212ENST00000528930 MED22Q15528 200 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 SSX2Q16385 188 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 SLC22A6Q4U2R8 563 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 FAM27D1Q5T7N8 215 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 MINOS1Q5TGZ0 78 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 DHRS7BQ6IAN0 325 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-212ENST00000528930 SLC35E4Q6ICL7 350 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 OR52W1Q6IF63 320 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 FAM122CQ6P4D5 195 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 GLIPR1L1Q6UWM5 242 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms