RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
CAPN1-213ENST00000527897 BPNT1O95861 308 aa12.36□□□□□ -0.43
CAPN1-213ENST00000527897 CHATP28329 748 aa12.36□□□□□ -0.43
CAPN1-213ENST00000527897 BLVRBP30043 206 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-213ENST00000527897 CLDN12P56749 244 aa12.36□□□□□ -0.43
CAPN1-213ENST00000527897 EMX1Q04741 257 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-213ENST00000527897 ZNF816Q0VGE8 651 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-213ENST00000527897 GNMTQ14749 295 aa12.36□□□□□ -0.43
CAPN1-213ENST00000527897 RAB11BQ15907 218 aa12.36□□□□□ -0.43
CAPN1-213ENST00000527897 ZNF367Q7RTV3 350 aa12.36□□□□□ -0.43
CAPN1-213ENST00000527897 NDUFA11Q86Y39 141 aa12.36□□□□□ -0.43
CAPN1-213ENST00000527897 LINC00311Q8N616 119 aa12.36□□□□□ -0.43
CAPN1-213ENST00000527897 OR52L2PQ8NGH6 319 aa12.36□□□□□ -0.43
CAPN1-213ENST00000527897 RTN4IP1Q8WWV3 396 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-213ENST00000527897 GFI1Q99684 422 aa12.36□□□□□ -0.43
CAPN1-213ENST00000527897 TCRBV4S1A1TA0A5B7 111 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 TMEM14DPA8MWL7 114 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 SLC17A2O00624 439 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 OPN1MWP04001 364 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 OPN1MW2P0DN77 364 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 OPN1MW3P0DN78 364 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 ARSBP15848 533 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 PPP1CCP36873 323 aaKnown RBP12.35□□□□□ -0.43
CAPN1-213ENST00000527897 ZNF134P52741 427 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 TBCEQ15813 527 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-213ENST00000527897 CT45A1Q5HYN5 189 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 C10orf99Q6UWK7 81 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 TGIF2LXQ8IUE1 241 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 GAPTQ8N292 157 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 C5orf56Q8N8D9 126 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 CT45A3Q8NHU0 189 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 WIPF2Q8TF74 440 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-213ENST00000527897 IL1F10Q8WWZ1 152 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 RBMXL1Q96E39 390 aaKnown RBP12.35□□□□□ -0.43
CAPN1-213ENST00000527897 MBNL3Q9NUK0 354 aaKnown RBP12.35□□□□□ -0.43
CAPN1-213ENST00000527897 PLEKHJ1Q9NW61 149 aa12.35□□□□□ -0.43
CAPN1-213ENST00000527897 A0A0A6YYD4 124 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 QRFPP83859 136 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 HES5Q5TA89 166 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 SLC25A48Q6ZT89 311 aaKnown RBP12.34□□□□□ -0.43
CAPN1-213ENST00000527897 C8orf31Q8N9H6 132 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 ZNF439Q8NDP4 499 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 OR4F17Q8NGA8 305 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 OR51D1Q8NGF3 324 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 OR4X2Q8NGF9 303 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 OR2T10Q8NGZ9 312 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-213ENST00000527897 OR4F4Q96R69 305 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 URM1Q9BTM9 101 aaKnown RBP12.34□□□□□ -0.43
CAPN1-213ENST00000527897 TM2D1Q9BX74 207 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 LPAR5Q9H1C0 372 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 ACOT13Q9NPJ3 140 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 ABRACLQ9P1F3 81 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 LINC00527Q9UJ94 153 aa12.34□□□□□ -0.43
CAPN1-213ENST00000527897 ZNF736B4DX44 427 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-213ENST00000527897 G3V4G9 280 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 SOCS1O15524 211 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 PLXNB1O43157 2135 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 PF4V1P10720 104 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 VEGFCP49767 419 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 SSX1Q16384 188 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 Q3ZCU0 254 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 MORN2Q502X0 79 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 ZNF329Q86UD4 541 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 ST6GALNAC6Q969X2 333 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 GALMQ96C23 342 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 NOL4LQ96MY1 436 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-213ENST00000527897 ABHD14AQ9BUJ0 271 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 Q9H521 79 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 V9GY05 133 aa12.33□□□□□ -0.44
CAPN1-213ENST00000527897 PSMB11A5LHX3 300 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 ADARB2-AS1A8MUL3 147 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 SERPINE3A8MV23 424 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 FGF16O43320 207 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 CD83Q01151 205 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 PDLIM3Q53GG5 364 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-213ENST00000527897 OR2W3Q7Z3T1 314 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 SLC35E3Q7Z769 313 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 IZUMO1Q8IYV9 350 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 SVOPQ8N4V2 548 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 FAM3DQ96BQ1 224 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 HDHD3Q9BSH5 251 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-213ENST00000527897 AK3Q9UIJ7 227 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 JPT1Q9UK76 154 aa12.32□□□□□ -0.44
CAPN1-213ENST00000527897 TSSC4Q9Y5U2 329 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-213ENST00000527897 TXNL1O43396 289 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 RGS11O94810 467 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 MOSP00540 346 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 CD37P11049 281 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 MYL9P24844 172 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 PSMB9P28065 219 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 CD1BP29016 333 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 OR10A3P58181 314 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 GABARAPL2P60520 117 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 HTD2P86397 168 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 HMGN3Q15651 99 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 C2orf76Q3KRA6 126 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 TCTEX1D4Q5JR98 221 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 ZNF554Q86TJ5 538 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms